Genome Information
Microbial Genomes

Total number of Microbial genomes available in PromBase: 913

Data downloaded from ftp://ftp.ncbi.nlm.nih.gov/genome/Bacteria/ on 23/3/2009



Genomic details for Onion yellows phytoplasma OY-M (NC_005303)


NCBI ID : NC_005303
Version : NC_005303.1
Clade: Bacteria-Firmicutes
Create Date: 16/12/03
Update Date: 21/07/08
Genome size: 860631 nts
%GC content: 27.74
%Coding (including protein and RNA): 73.75
No. of protein coding genes: 754
No. of RNA coding genes: 39
No of Adenine(A) Bases : 314336
No of Guanine(G) Bases : 118849
No of Thymine(T) Bases : 307582
No of Cytosine(C) Bases : 119861
No of non-ATGC Base : 3



Analysis of nucleotide composition and structural properties in promoter regions of protein coding genes





Gene table for NC_005303
No. of Protein coding genes : 754
No. of RNA coding genes : 39

No. of overlapping genes in this genome : 110
Click here to download overlapping gene details


Gene ID Gene name Left end
position
Right end
position
Length Transcription
direction
Gene Product
PAM001
dnaA
1
1524
1524
+
PROTEIN:chromosomal replication initiator protein
PAM002
dnaN
1831
2967
1137
+
PROTEIN:DNA polymerase III beta subunit
PAM003
PAM003
4447
4866
420
+
PROTEIN:hypothetical protein
PAM004
PAM004
4948
5220
273
+
PROTEIN:hypothetical protein
PAM005
pgpB
5467
6222
756
-
PROTEIN:membrane-associated phospholipid phosphata
PAM006
PAM006
6431
7063
633
-
PROTEIN:hypothetical protein
PAM007
folC
7660
8976
1317
+
PROTEIN:folylpolyglutamate synthase
PAM008
rfaG
10428
11675
1248
+
PROTEIN:1,2-diacylglycerol 3-glucosyltransferase
PAM009
rpsF
12222
12509
288
+
PROTEIN:30S ribosomal protein S6
PAM010
ssb
12524
12868
345
+
PROTEIN:single-stranded DNA-binding protein
PAM011
rpsR
13006
13245
240
+
PROTEIN:30S ribosomal protein S18
PAM012
PAM012
13316
15889
2574
+
PROTEIN:exopolyphosphatase-related protein
PAM013
dnaB
15886
17229
1344
+
PROTEIN:replicative DNA helicase
PAM014
prfA
17300
18355
1056
+
PROTEIN:protein chain release factor A
PAM015
sua5
18448
19005
558
+
PROTEIN:translation factor
PAM016
holA
19044
20015
972
-
PROTEIN:DNA polymerase III delta subunit
PAM017
PAM017
20275
20865
591
+
PROTEIN:GTPase EngB
PAM018
valS
21671
23713
2043
+
PROTEIN:valyl-tRNA synthetase
PAM019
PAM019
23899
24366
468
+
PROTEIN:hypothetical protein
PAM020
cbiO
24424
26190
1767
+
PROTEIN:ABC-type cobalt transport system, ATPase c
PAM021
PAM021
27755
28120
366
+
PROTEIN:hypothetical protein
PAM022
dppB
28890
29273
384
+
PROTEIN:ABC-type dipeptide/oligopeptide transport
PAM023
PAM023
29578
30684
1107
+
PROTEIN:hypothetical protein
PAM024
PAM024
30946
31737
792
+
PROTEIN:hypothetical protein
PAM025
dppD
32258
33295
1038
+
PROTEIN:ABC-type dipeptide/oligopeptide transport
PAM026
oppF
33626
34087
462
+
PROTEIN:ABC-type dipeptide/oligopeptide transport
PAM027
PAM027
34179
37277
3099
-
PROTEIN:hypothetical protein
PAM028
ibpA
37635
38057
423
+
PROTEIN:molecular chaperone
PAM029
PAM029
38180
38635
456
-
PROTEIN:hypothetical protein
PAM030
mgtA
38845
41607
2763
-
PROTEIN:cation transport ATPase
PAM031
PAM031
42625
43755
1131
+
PROTEIN:hypothetical protein
PAM032
PAM032
44868
45518
651
+
PROTEIN:hypothetical protein
PAM033
PAM033
45800
46258
459
+
PROTEIN:hypothetical protein
PAM034
PAM034
46529
47068
540
+
PROTEIN:hypothetical protein
PAM035
PAM035
47948
48301
354
+
PROTEIN:hypothetical protein
PAM036
PAM036
48277
48939
663
+
PROTEIN:hypothetical protein
PAM037
smc
48879
49766
888
+
PROTEIN:chromosome segregation ATPase-like protein
PAM038
PAM038
50195
50506
312
+
PROTEIN:hypothetical protein
PAM039
PAM039
50922
52589
1668
+
PROTEIN:hypothetical protein
PAM040
fliA
52707
53312
606
+
PROTEIN:DNA-directed RNA polymerase specialized si
PAM041
ssb
53544
53873
330
+
PROTEIN:single-stranded DNA-binding protein
PAM042
dam
54352
55011
660
+
PROTEIN:site-specific DNA methylase
PAM043
himA
55120
55410
291
+
PROTEIN:nucleoid DNA-binding protein
PAM044
PAM044
55772
56566
795
+
PROTEIN:hypothetical protein
PAM045
PAM045
56624
57805
1182
+
PROTEIN:hypothetical protein
PAM046
PAM046
58212
59057
846
+
PROTEIN:hypothetical protein
PAM047
PAM047
58996
60171
1176
+
PROTEIN:hypothetical protein
PAM048
PAM048
60238
60963
726
+
PROTEIN:hypothetical protein
PAM049
PAM049
61011
61388
378
+
PROTEIN:hypothetical protein
PAM050
PAM050
61925
62146
222
+
PROTEIN:hypothetical protein
PAM051
PAM051
62166
63443
1278
+
PROTEIN:hypothetical protein
PAM052
PAM052
63851
65281
1431
+
PROTEIN:hypothetical protein
PAM053
PAM053
65858
66352
495
+
PROTEIN:hypothetical protein
PAM054
nrdA
67342
69651
2310
+
PROTEIN:ribonucleotide reductase alpha subunit
PAM055
nrdF
70037
71089
1053
+
PROTEIN:ribonucleotide-diphosphate reductase subun
PAM056
PAM056
73506
73904
399
+
PROTEIN:hypothetical protein
PAM057
PAM057
74018
74953
936
+
PROTEIN:hypothetical protein
PAM058
mscL
75777
76295
519
+
PROTEIN:large-conductance mechanosensitive channel
PAM059
mdlB
76501
78225
1725
+
PROTEIN:ABC-type multidrug/protein/lipid transport
PAM060
PAM060
80717
81424
708
+
PROTEIN:hypothetical protein
PAM061
PAM061
81782
82084
303
+
PROTEIN:hypothetical protein
PAM062
PAM062
83133
83315
183
+
PROTEIN:hypothetical protein
PAM063
himA
83594
83884
291
+
PROTEIN:nucleoid DNA-binding protein
PAM064
hflB
84325
86229
1905
+
PROTEIN:ATP-dependent Zn protease
PAM065
PAM065
86315
86587
273
+
PROTEIN:hypothetical protein
PAM066
PAM066
86592
87452
861
+
PROTEIN:hypothetical protein
PAM067
PAM067
87922
88545
624
+
PROTEIN:hypothetical protein
PAM068
PAM068
88612
89337
726
+
PROTEIN:hypothetical protein
PAM069
PAM069
89402
90103
702
+
PROTEIN:hypothetical protein
PAM070
PAM070
90298
90870
573
+
PROTEIN:hypothetical protein
PAM071
PAM071
91415
92062
648
+
PROTEIN:hypothetical protein
PAM072
PAM072
92123
92512
390
+
PROTEIN:hypothetical protein
PAM073
PAM073
92749
93516
768
+
PROTEIN:hypothetical protein
PAM074
dnaB
93535
95034
1500
+
PROTEIN:replicative DNA helicase
PAM075
PAM075
95046
95924
879
+
PROTEIN:hypothetical protein
PAM076
PAM076
99183
100070
888
+
PROTEIN:hypothetical protein
PAM077
artM
100067
101188
1122
+
PROTEIN:ABC-type amino acid transport system, perm
PAM078
PAM078
101697
103502
1806
+
PROTEIN:ABC-type amino acid transport system, perm
PAM079
glnQ
103752
104231
480
+
PROTEIN:ABC-type polar amino acid transport system
PAM080
PAM080
104409
104654
246
+
PROTEIN:hypothetical protein
PAM081
rpsT
105231
105491
261
+
PROTEIN:30S ribosomal protein S20
PAM082
PAM082
105664
105870
207
-
PROTEIN:hypothetical protein
PAM083
serS
106430
107704
1275
+
PROTEIN:seryl-tRNA synthetase
PAM084
PAM084
107898
108221
324
+
PROTEIN:hypothetical protein
PAM085
PAM085
108383
109348
966
+
PROTEIN:hypothetical protein
PAM086
rplU
109530
109838
309
+
PROTEIN:50S ribosomal protein L21
PAM087
PAM087
109844
110179
336
+
PROTEIN:hypothetical protein
PAM088
rpmA
110181
110459
279
+
PROTEIN:50S ribosomal protein L27
PAM089
obgE
110486
111754
1269
+
PROTEIN:GTPase ObgE
PAM090
gepA
112097
112297
201
+
PROTEIN:uncharacterized phage-associated protein
PAMs01
RNaseP
112684
113103
420
+
RNA:ribonuclease P RNA
PAM091
PAM091
113366
114295
930
-
PROTEIN:hypothetical protein
PAM092
znuA
115631
116776
1146
+
PROTEIN:ABC-type Mn/Zn transport system, periplasm
PAM093
znuC
116807
117571
765
+
PROTEIN:ABC-type Mn/Zn transport system, ATPase co
PAM094
znuB
117672
119831
2160
+
PROTEIN:ABC-type Mn/Zn transport system, permease
PAM095
PAM095
120521
121441
921
+
PROTEIN:hypothetical protein
PAM096
phnL
121578
123077
1500
+
PROTEIN:ABC-type transport system, involved in lip
PAM097
nlpA
123489
124316
828
+
PROTEIN:ABC-type uncharacterized transport system,
PAM098
PAM098
124440
124871
432
+
PROTEIN:hypothetical protein
PAM099
PAM099
124840
125193
354
+
PROTEIN:hypothetical protein
PAM100
iscU
125336
125773
438
+
PROTEIN:nifU-like protein
PAM101
PAM101
125929
126663
735
-
PROTEIN:hypothetical protein
PAM102
pcnB
127074
128312
1239
-
PROTEIN:tRNA nucleotidyltransferase/polyA polymera
PAM103
PAM103
128672
129157
486
-
PROTEIN:cytosine/adenosine deaminase
PAM104
tdk
129216
129845
630
-
PROTEIN:thymidine kinase
PAM105
rpmE
129965
130246
282
-
PROTEIN:50S ribosomal protein L31
PAM106
rpmB
130471
130659
189
-
PROTEIN:50S ribosomal protein L28
PAM107
PAM107
131206
131559
354
+
PROTEIN:hypothetical protein
PAM108
PAM108
131721
132260
540
+
PROTEIN:hypothetical protein
PAM109
PAM109
133602
134309
708
+
PROTEIN:hypothetical protein
PAM110
PAM110
134511
135191
681
+
PROTEIN:hypothetical protein
PAM111
PAM111
135268
135834
567
+
PROTEIN:hypothetical protein
PAM112
PAM112
135841
136182
342
+
PROTEIN:hypothetical protein
PAM113
PAM113
136537
136968
432
+
PROTEIN:hypothetical protein
PAM114
PAM114
137018
137326
309
-
PROTEIN:hypothetical protein
PAM115
PAM115
137373
138002
630
+
PROTEIN:hypothetical protein
PAM116
PAM116
138038
138400
363
+
PROTEIN:hypothetical protein
PAM117
hflB
138877
140088
1212
+
PROTEIN:ATP-dependent Zn protease
PAM118
PAM118
140090
140833
744
+
PROTEIN:hypothetical protein
PAM119
PAM119
141035
141751
717
+
PROTEIN:hypothetical protein
PAM120
groES
142019
142288
270
+
PROTEIN:chaperonin GroES
PAM121
groEL
142480
144090
1611
+
PROTEIN:chaperonin GroEL
PAM122
amp
144248
144949
702
+
PROTEIN:antigenic membrane protein
PAM123
PAM123
145355
146122
768
+
PROTEIN:hypothetical protein
PAM124
nadE
146315
147289
975
+
PROTEIN:NAD synthase
PAM125
trmU
147401
148537
1137
+
PROTEIN:tRNA(5-methylaminomethyl-2-thiouridylate)
PAM126
spoT
148452
150842
2391
+
PROTEIN:guanosine polyphosphate pyrophosphohydrola
PAM127
hisS
151153
152421
1269
+
PROTEIN:histidyl-tRNA synthetase
PAM128
aspS
152425
154185
1761
+
PROTEIN:aspartyl-tRNA synthetase
PAM129
mesJ
154195
155505
1311
+
PROTEIN:hypothetical protein
PAM130
hflB
155627
157651
2025
+
PROTEIN:ATP-dependent Zn protease
PAM131
rluA
157887
158798
912
+
PROTEIN:pseudouridylate synthase
PAM132
abc
159000
159611
612
+
PROTEIN:uncharacterized ABC-type transport system
PAM133
nlpA
159694
160737
1044
+
PROTEIN:ABC-type uncharacterized transport system,
PAM134
PAM134
160750
161451
702
+
PROTEIN:permease component of an uncharacterized A
PAM135
PAM135
161563
161895
333
+
PROTEIN:hypothetical protein
PAM136
rpsO
161971
162195
225
+
PROTEIN:30S ribosomal protein S15
PAM137
PAM137
162349
162891
543
+
PROTEIN:hypothetical protein
PAM138
rplM
163245
163703
459
+
PROTEIN:50S ribosomal protein L13
PAM139
rpsI
163708
164100
393
+
PROTEIN:30S ribosomal protein S9
PAM140
glnS
164200
165549
1350
+
PROTEIN:glutamyl- and glutaminyl-tRNA synthetase
PAM141
cysS
165715
167031
1317
+
PROTEIN:cysteinyl-tRNA synthetase
PAM142
rplM
167203
168843
1641
+
PROTEIN:ribosomal protein L13
PAM143
udk
169118
170422
1305
+
PROTEIN:uridine kinase
PAM144
spoU
170667
171371
705
+
PROTEIN:rRNA methylase
PAM145
ppa
171465
172019
555
+
PROTEIN:inorganic pyrophosphatase
PAM146
smpB
172267
172725
459
+
PROTEIN:SsrA-binding protein
PAM147
PAM147
172933
174789
1857
+
PROTEIN:hypothetical protein
PAM148
nusA
175032
176105
1074
+
PROTEIN:transcription elongation factor NusA
PAM149
PAM149
176111
176368
258
+
PROTEIN:hypothetical protein
PAM150
infB
176528
178387
1860
+
PROTEIN:translation initiation factor IF-2
PAM151
rbfA
178391
178732
342
+
PROTEIN:ribosome-binding factor A
PAM152
pth
179034
179600
567
+
PROTEIN:peptidyl-tRNA hydrolase
PAM153
PAM153
179708
181000
1293
-
PROTEIN:hemolysin
PAM154
priA
181476
183935
2460
-
PROTEIN:primosomal protein N'
PAM155
PAM155
184282
185001
720
-
PROTEIN:hypothetical protein
PAM156
PAM156
186032
186349
318
-
PROTEIN:hypothetical protein
PAM157
PAM157
187236
188186
951
-
PROTEIN:hypothetical protein
PAM158
PAM158
188497
189192
696
+
PROTEIN:hemolysin III-like protein
PAM159
ackA
189434
190666
1233
+
PROTEIN:acetate kinase
PAMt01
Ser-tRNA
190713
190797
85
+
RNA:Ser tRNA
PAMt02
His-tRNA
191241
191313
73
+
RNA:His tRNA
PAMt03
Gln-tRNA
191402
191473
72
+
RNA:Gln tRNA
PAMt04
Leu-tRNA
191527
191605
79
+
RNA:Leu tRNA
PAMt05
Trp-tRNA
191629
191700
72
+
RNA:Trp tRNA
PAM160
PAM160
192132
192719
588
+
PROTEIN:hypothetical protein
PAM161
PAM161
192871
193596
726
-
PROTEIN:hypothetical protein
PAM162
PAM162
193875
194648
774
+
PROTEIN:hypothetical protein
PAM163
ung
194730
195371
642
+
PROTEIN:uracil-DNA glycosylase
PAM164
dut
195555
196007
453
+
PROTEIN:dUTPase
PAM165
rpsB
196610
197425
816
+
PROTEIN:30S ribosomal protein S2
PAM166
tsf
197515
198351
837
+
PROTEIN:elongation factor Ts
PAM167
pyrH
198441
199166
726
+
PROTEIN:uridylate kinase
PAM168
frr
199169
199723
555
+
PROTEIN:ribosome recycling factor
PAM169
cdsA
199795
200712
918
+
PROTEIN:CDP-diglyceride synthetase
PAM170
tpiA
200974
201798
825
+
PROTEIN:triosephosphate isomerase
PAM171
cof
201977
202774
798
+
PROTEIN:hypothetical protein
PAM172
fba
203036
203902
867
+
PROTEIN:fructose/tagatose bisphosphate aldolase
PAM173
PAM173
204009
204341
333
+
PROTEIN:hypothetical protein
PAM174
pgk
204612
205808
1197
+
PROTEIN:phosphoglycerate kinase
PAM175
gapA
205969
206976
1008
+
PROTEIN:glyceraldehyde-3-phosphate dehydrogenase
PAM176
PAM176
207358
208038
681
+
PROTEIN:hypothetical protein
PAM177
PAM177
208663
209136
474
+
PROTEIN:hypothetical protein
PAM178
PAM178
209279
210967
1689
+
PROTEIN:oligoendopeptidase F
PAM179
cbiO
211167
211982
816
+
PROTEIN:ABC-type cobalt transport system, ATPase c
PAM180
cbiQ
212828
213877
1050
+
PROTEIN:ABC-type cobalt transport system, permease
PAM181
glyA
213971
215221
1251
+
PROTEIN:glycine hydroxymethyltransferase
PAM182
PAM182
215698
216618
921
+
PROTEIN:hypothetical protein
PAM183
PAM183
216815
217906
1092
+
PROTEIN:translation-associated GTPase
PAM184
ileS
218019
220721
2703
+
PROTEIN:isoleucyl-tRNA synthetase
PAM185
PAM185
220738
221556
819
+
PROTEIN:hypothetical protein
PAM186
mgtA
221711
224467
2757
+
PROTEIN:cation transport ATPase
PAM187
PAM187
224522
225679
1158
-
PROTEIN:Zn-dependent carboxypeptidase
PAM188
PAM188
225774
226019
246
-
PROTEIN:Zn-dependent carboxypeptidase
PAM189
dppC
226296
227099
804
-
PROTEIN:ABC-type dipeptide/oligopeptide system, pe
PAM190
dppB
227128
228054
927
-
PROTEIN:ABC-type dipeptide/oligopeptide transport
PAM191
oppA
231479
233050
1572
-
PROTEIN:ABC-type dipeptide/oligopeptide transport
PAM192
dppD
233256
234059
804
-
PROTEIN:ABC-type dipeptide/oligopeptide transport
PAM193
PAM193
234071
234652
582
-
PROTEIN:hypothetical protein
PAM194
PAM194
235406
238492
3087
-
PROTEIN:hypothetical protein
PAM195
PAM195
238797
239279
483
-
PROTEIN:hypothetical protein
PAM196
PAM196
239527
240111
585
-
PROTEIN:hypothetical protein
PAM197
PAM197
240541
240843
303
+
PROTEIN:hypothetical protein
PAM198
rpmF
241162
241368
207
+
PROTEIN:50S ribosomal protein L32
PAM199
rpsJ
242717
243040
324
+
PROTEIN:30S ribosomal protein S10
PAM200
rplC
243429
243902
474
+
PROTEIN:ribosomal protein L3
PAM201
rplD
243889
244512
624
+
PROTEIN:50S ribosomal protein L4
PAM202
rplW
244512
244802
291
+
PROTEIN:50S ribosomal protein L23
PAM203
rplB
244862
245692
831
+
PROTEIN:50S ribosomal protein L2
PAM204
rpsS
245705
245986
282
+
PROTEIN:30S ribosomal protein S19
PAM205
rplV
246003
246392
390
+
PROTEIN:50S ribosomal protein L22
PAM206
rpsC
246376
247134
759
+
PROTEIN:30S ribosomal protein S3
PAM207
rplP
247112
247534
423
+
PROTEIN:50S ribosomal protein L16
PAM208
rpmC
247531
247851
321
+
PROTEIN:50S ribosomal protein L29
PAM209
rpsQ
247851
248114
264
+
PROTEIN:30S ribosomal protein S17
PAM210
rplN
248127
248489
363
+
PROTEIN:50S ribosomal protein L14
PAM211
rplX
248611
248850
240
+
PROTEIN:ribosomal protein L24
PAM212
rplE
248866
249411
546
+
PROTEIN:50S ribosomal protein L5
PAM213
rpsN
249426
249695
270
+
PROTEIN:30S ribosomal protein S14
PAM214
rpsH
249717
250109
393
+
PROTEIN:30S ribosomal protein S8
PAM215
rplF
250156
250710
555
+
PROTEIN:50S ribosomal protein L6
PAM216
rplR
250720
251073
354
+
PROTEIN:50S ribosomal protein L18
PAM217
rpsE
251088
251603
516
+
PROTEIN:30S ribosomal protein S5
PAM218
rpmD
251600
251797
198
+
PROTEIN:50S ribosomal protein L30
PAM219
rplO
251855
252235
381
+
PROTEIN:50S ribosomal protein L15
PAM220
secY
252238
253479
1242
+
PROTEIN:preprotein translocase subunit SecY
PAM221
adk
253498
254151
654
+
PROTEIN:adenylate kinase
PAM222
map
254148
254891
744
+
PROTEIN:methionine aminopeptidase
PAM223
infA
254967
255203
237
+
PROTEIN:translation initiation factor IF-1
PAM224
rpmJ
255216
255332
117
+
PROTEIN:50S ribosomal protein L36
PAM225
rpsM
255345
255710
366
+
PROTEIN:30S ribosomal protein S13
PAM226
rpsK
255752
256138
387
+
PROTEIN:30S ribosomal protein S11
PAM227
rpoA
256169
256912
744
+
PROTEIN:DNA-directed RNA polymerase alpha subunit
PAM228
rplQ
257206
257562
357
+
PROTEIN:50S ribosomal protein L17
PAM229
truA
257734
258465
732
+
PROTEIN:tRNA pseudouridine synthase A
PAM230
tmk
258513
259136
624
+
PROTEIN:thymidylate kinase
PAM231
holB
259133
260122
990
+
PROTEIN:DNA polymerase III, delta prime subunit
PAM232
PAM232
260206
261063
858
+
PROTEIN:hypothetical protein
PAM233
metG
261149
262711
1563
+
PROTEIN:methionyl-tRNA synthetase
PAM234
PAM234
263120
263794
675
+
PROTEIN:hypothetical protein
PAM235
PAM235
263801
264769
969
+
PROTEIN:hypothetical protein
PAM236
trxA
265227
265478
252
+
PROTEIN:thioredoxin
PAM237
truB
265512
266363
852
+
PROTEIN:pseudouridine synthase
PAM238
rsuA
266482
267219
738
+
PROTEIN:16S rRNA pseudouridylate synthase
PAM239
cmk
267259
267930
672
+
PROTEIN:cytidylate kinase
PAM240
engA
267931
269367
1437
+
PROTEIN:GTP-binding protein EngA
PAM241
gpsA
269418
270569
1152
+
PROTEIN:glycerol 3-phosphate dehydrogenase
PAM242
himA
270744
271028
285
+
PROTEIN:nucleoid DNA-binding protein
PAM243
PAM243
271525
272415
891
+
PROTEIN:hypothetical protein
PAM244
rpmG
272498
272647
150
+
PROTEIN:50S ribosomal protein L33
PAM245
pepP
272915
274171
1257
+
PROTEIN:xaa-Pro aminopeptidase
PAMt06
Cys-tRNA
274207
274277
71
+
RNA:Cys tRNA
PAMt07
Ser-tRNA
274436
274524
89
+
RNA:Ser tRNA
PAM246
proS
274923
276347
1425
+
PROTEIN:prolyl-tRNA synthetase
PAM247
rpmH
276574
276708
135
+
PROTEIN:50S ribosomal protein L34
PAM248
rnpA
276812
277237
426
+
PROTEIN:ribonuclease P
PAM249
yidC
277256
278833
1578
+
PROTEIN:preprotein translocase subunit YidC
PAMt08
Tyr-tRNA
279196
279276
81
+
RNA:Tyr tRNA
PAMr01
rrna
279394
280928
1535
+
RNA:16S ribosomal RNA
PAMr02
rrna
280953
284036
3084
+
RNA:23S ribosomal RNA
PAMt09
Ile-tRNA
281032
281105
74
+
RNA:Ile tRNA
PAM250
PAM250
282933
283574
642
-
PROTEIN:hypothetical protein
PAMr03
rrna
284072
284180
109
+
RNA:5S ribosomal RNA
PAMt10
Val-tRNA
284196
284268
73
+
RNA:Val tRNA
PAMt11
Asn-tRNA
284278
284351
74
+
RNA:Asn tRNA
PAM251
pnp
284635
286782
2148
+
PROTEIN:polynucleotide phosphorylase/polyadenylase
PAM252
mgtA
286852
290022
3171
+
PROTEIN:cation transport ATPase
PAM253
rpmG
290245
290430
186
+
PROTEIN:ribosomal protein L33
PAM254
secE
290447
290857
411
+
PROTEIN:preprotein translocase subunit SecE
PAM255
nusG
290859
291473
615
+
PROTEIN:transcription antiterminator
PAM256
rplK
291671
292096
426
+
PROTEIN:50S ribosomal protein L11
PAM257
rplA
292190
292882
693
+
PROTEIN:50S ribosomal protein L1
PAM258
rplJ
292922
293431
510
+
PROTEIN:50S ribosomal protein L10
PAM259
rplL
293443
293853
411
+
PROTEIN:50S ribosomal protein L7/L12
PAM260
rpoB
294025
297846
3822
+
PROTEIN:DNA-directed RNA polymerase subunit beta
PAM261
rpoC
297849
301910
4062
+
PROTEIN:DNA-directed RNA polymerase beta' subunit
PAM262
rpsL
301931
302350
420
+
PROTEIN:30S ribosomal protein S12
PAM263
rpsG
302439
302909
471
+
PROTEIN:30S ribosomal protein S7
PAM264
fusA
302934
305000
2067
+
PROTEIN:elongation factor G
PAM265
tufB
305131
306315
1185
+
PROTEIN:elongation factor Tu
PAM266
PAM266
306887
307555
669
+
PROTEIN:hypothetical protein
PAM267
gidB
307603
308241
639
-
PROTEIN:S-adenosylmethionine-dependent methyltrans
PAM268
gidA
308228
310081
1854
-
PROTEIN:tRNA uridine 5-carboxymethylaminomethyl mo
PAM269
PAM269
310138
310833
696
-
PROTEIN:hypothetical protein
PAMt12
Arg-tRNA
311445
311518
74
+
RNA:Arg tRNA
PAM270
PAM270
311826
312911
1086
+
PROTEIN:hypothetical protein
PAM271
PAM271
313230
313541
312
+
PROTEIN:hypothetical protein
PAM272
PAM272
314047
315633
1587
+
PROTEIN:hypothetical protein
PAM273
PAM273
315658
316119
462
+
PROTEIN:hypothetical protein
PAM274
PAM274
316094
316279
186
+
PROTEIN:hypothetical protein
PAM275
miaA
316651
317526
876
+
PROTEIN:tRNA delta(2)-isopentenylpyrophosphate tra
PAM276
efp
317585
318154
570
+
PROTEIN:translation elongation factor EF-P
PAM277
PAM277
318371
319135
765
+
PROTEIN:hypothetical protein
PAM278
PAM278
319165
320052
888
+
PROTEIN:hypothetical protein
PAM279
topA
320143
322086
1944
+
PROTEIN:topoisomerase IA
PAM280
norM
322195
323790
1596
-
PROTEIN:Na+-driven multidrug efflux pump
PAM281
pfkA
324839
325837
999
+
PROTEIN:6-phosphofructokinase
PAM282
PAM282
325982
327466
1485
+
PROTEIN:hypothetical protein
PAM283
pgi
327589
328869
1281
+
PROTEIN:glucose-6-phosphate isomerase
PAM284
eno
329038
330330
1293
+
PROTEIN:enolase
PAM285
gpmI
330452
331990
1539
+
PROTEIN:phosphoglyceromutase
PAM286
citS
332415
333560
1146
+
PROTEIN:malate/citrate symporter
PAM287
pykF
333629
334969
1341
+
PROTEIN:pyruvate kinase
PAM288
PAM288
335094
336308
1215
-
PROTEIN:hypothetical protein
PAM289
PAM289
336401
337345
945
-
PROTEIN:hypothetical protein
PAM290
argE
337963
339339
1377
+
PROTEIN:dipeptidase PepV
PAM291
PAM291
339373
339753
381
+
PROTEIN:hypothetical protein
PAM292
argE
339884
340327
444
+
PROTEIN:acetylornithine deacetylase
PAM293
thyA
340372
341238
867
+
PROTEIN:thymidylate synthase
PAM294
folA
341235
341726
492
+
PROTEIN:dihydrofolate reductase
PAM295
plsC
341720
342529
810
+
PROTEIN:1-acyl-sn-glycerol-3-phosphate acyltransfe
PAM296
PAM296
342630
343058
429
+
PROTEIN:hypothetical protein
PAM297
PAM297
343147
343494
348
-
PROTEIN:hypothetical protein
PAM298
PAM298
343499
343714
216
-
PROTEIN:hypothetical protein
PAM299
PAM299
343768
344328
561
-
PROTEIN:N6-adenine-specific methylase
PAM300
PAM300
344325
344924
600
-
PROTEIN:hypothetical protein
PAM301
PAM301
344911
345480
570
-
PROTEIN:hypothetical protein
PAM302
greA
345470
345982
513
-
PROTEIN:transcription elongation factor
PAM303
smtA
345993
346577
585
-
PROTEIN:SAM-dependent methyltransferase
PAM304
PAM304
346579
347034
456
-
PROTEIN:Hollyday junction resolvase
PAM305
alaS
347381
349975
2595
-
PROTEIN:alanyl-tRNA synthetase
PAM306
ksgA
350438
351805
1368
+
PROTEIN:dimethyladenosine transferase
PAM307
hflB
351876
353144
1269
-
PROTEIN:ATP-dependent Zn protease
PAM308
PAM308
353275
353958
684
-
PROTEIN:hypothetical protein
PAM309
lplA
354084
355100
1017
-
PROTEIN:lipoate-protein ligase A
PAM310
PAM310
356125
356589
465
+
PROTEIN:hypothetical protein
PAM311
PAM311
357507
357839
333
+
PROTEIN:hypothetical protein
PAM312
PAM312
358034
358504
471
+
PROTEIN:hypothetical protein
PAM313
PAM313
358467
359141
675
+
PROTEIN:hypothetical protein
PAM314
PAM314
359173
360414
1242
+
PROTEIN:hypothetical protein
PAM315
uvrD
360616
363732
3117
+
PROTEIN:ATP-dependent DNA helicase
PAM316
hflB
363945
365318
1374
-
PROTEIN:ATP-dependent Zn protease
PAM317
himA
365361
365651
291
-
PROTEIN:nucleoid DNA-binding protein
PAM318
PAM318
366112
366591
480
-
PROTEIN:hypothetical protein
PAM319
ssb
366900
367229
330
-
PROTEIN:single-stranded DNA-binding protein
PAM320
fliA
367444
368073
630
-
PROTEIN:DNA-directed RNA polymerase specialized si
PAM321
PAM321
368215
368709
495
+
PROTEIN:hypothetical protein
PAM322
PAM322
368724
369350
627
+
PROTEIN:hypothetical protein
PAM323
fliA
369487
370107
621
+
PROTEIN:DNA-directed RNA polymerase specialized si
PAM324
ssb
370112
370441
330
+
PROTEIN:single-stranded DNA-binding protein
PAM325
himA
370495
370785
291
+
PROTEIN:nucleoid DNA-binding protein
PAM326
hflB
370828
372378
1551
+
PROTEIN:ATP-dependent Zn protease
PAM327
PAM327
373206
374069
864
+
PROTEIN:hypothetical protein
PAM328
PAM328
374032
374439
408
+
PROTEIN:hypothetical protein
PAM329
PAM329
375253
375576
324
+
PROTEIN:hypothetical protein
PAM330
PAM330
376003
376815
813
+
PROTEIN:hypothetical protein
PAM331
PAM331
376958
377524
567
+
PROTEIN:hypothetical protein
PAM332
PAM332
377580
377939
360
+
PROTEIN:hypothetical protein
PAM333
PAM333
378595
379044
450
+
PROTEIN:hypothetical protein
PAM334
PAM334
381179
381676
498
+
PROTEIN:hypothetical protein
PAM335
PAM335
381801
382148
348
+
PROTEIN:hypothetical protein
PAM336
PAM336
382174
382650
477
+
PROTEIN:hypothetical protein
PAM337
tra5
383271
384200
930
-
PROTEIN:putative transposase
PAM338
PAM338
384618
384992
375
-
PROTEIN:hypothetical protein
PAM339
PAM339
384989
385417
429
-
PROTEIN:hypothetical protein
PAM340
PAM340
386376
386744
369
-
PROTEIN:hypothetical protein
PAM341
PAM341
387203
387796
594
-
PROTEIN:hypothetical protein
PAM342
PAM342
388385
390145
1761
-
PROTEIN:retron-type reverse transcriptase
PAM343
PAM343
390793
391398
606
-
PROTEIN:hypothetical protein
PAM344
tmk
391588
392202
615
-
PROTEIN:thymidylate kinase
PAM345
PAM345
392276
392905
630
-
PROTEIN:hypothetical protein
PAM346
PAM346
393437
394282
846
-
PROTEIN:hypothetical protein
PAM347
PAM347
394311
395036
726
-
PROTEIN:hypothetical protein
PAM348
smc
395103
395750
648
-
PROTEIN:chromosome segregation ATPase-like protein
PAM349
PAM349
396223
397095
873
-
PROTEIN:hypothetical protein
PAM350
PAM350
397128
397973
846
-
PROTEIN:hypothetical protein
PAM351
PAM351
398554
398871
318
+
PROTEIN:hypothetical protein
PAM352
PAM352
399066
399539
474
+
PROTEIN:hypothetical protein
PAM353
PAM353
399502
400176
675
+
PROTEIN:hypothetical protein
PAM354
PAM354
400208
401287
1080
+
PROTEIN:hypothetical protein
PAM355
uvrD
401509
404625
3117
+
PROTEIN:ATP-dependent DNA helicase
PAM356
hflB
404838
406211
1374
-
PROTEIN:ATP-dependent Zn protease
PAM357
himA
406254
406544
291
-
PROTEIN:nucleoid DNA-binding protein
PAM358
PAM358
407005
407484
480
-
PROTEIN:hypothetical protein
PAM359
ssb
407793
408122
330
-
PROTEIN:single-stranded DNA-binding protein
PAM360
fliA
408337
408966
630
-
PROTEIN:DNA-directed RNA polymerase specialized si
PAM361
PAM361
409108
409602
495
+
PROTEIN:hypothetical protein
PAM362
PAM362
409617
410243
627
+
PROTEIN:hypothetical protein
PAM363
fliA
410380
411000
621
+
PROTEIN:DNA-directed RNA polymerase specialized si
PAM364
ssb
411005
411334
330
+
PROTEIN:single-stranded DNA-binding protein
PAM365
himA
411388
411678
291
+
PROTEIN:nucleoid DNA-binding protein
PAM366
hflB
411721
413271
1551
+
PROTEIN:ATP-dependent Zn protease
PAM367
PAM367
414099
414962
864
+
PROTEIN:hypothetical protein
PAM368
PAM368
414925
415332
408
+
PROTEIN:hypothetical protein
PAM369
PAM369
416146
416469
324
+
PROTEIN:hypothetical protein
PAM370
PAM370
416896
417708
813
+
PROTEIN:hypothetical protein
PAM371
PAM371
417851
418417
567
+
PROTEIN:hypothetical protein
PAM372
PAM372
418473
418832
360
+
PROTEIN:hypothetical protein
PAM373
PAM373
419488
419937
450
+
PROTEIN:hypothetical protein
PAM374
tmk
420049
420486
438
+
PROTEIN:thymidylate kinase
PAM375
PAM375
422068
422565
498
+
PROTEIN:hypothetical protein
PAM376
PAM376
423059
423451
393
+
PROTEIN:hypothetical protein
PAM377
PAM377
423544
424179
636
+
PROTEIN:hypothetical protein
PAM378
PAM378
424246
424584
339
+
PROTEIN:hypothetical protein
PAM379
PAM379
425341
426198
858
+
PROTEIN:hypothetical protein
PAM380
smc
426668
427399
732
+
PROTEIN:chromosome segregation ATPase-like protein
PAM381
PAM381
427492
427803
312
+
PROTEIN:hypothetical protein
PAM382
PAM382
428227
428550
324
+
PROTEIN:hypothetical protein
PAM383
PAM383
428877
429335
459
+
PROTEIN:hypothetical protein
PAM384
PAM384
430013
430201
189
-
PROTEIN:hypothetical protein
PAM385
PAM385
430185
430763
579
-
PROTEIN:hypothetical protein
PAM386
PAM386
431345
431971
627
-
PROTEIN:hypothetical protein
PAM387
PAM387
432561
433439
879
-
PROTEIN:hypothetical protein
PAM388
dnaB
433451
434944
1494
-
PROTEIN:replicative DNA helicase
PAM389
PAM389
434946
435569
624
-
PROTEIN:hypothetical protein
PAM390
PAM390
435989
436369
381
-
PROTEIN:hypothetical protein
PAM391
PAM391
436440
437078
639
-
PROTEIN:hypothetical protein
PAM392
PAM392
437673
438128
456
-
PROTEIN:hypothetical protein
PAM393
hflB
438220
440514
2295
-
PROTEIN:ATP-dependent Zn protease
PAM394
himA
440557
440847
291
-
PROTEIN:nucleoid DNA-binding protein
PAM395
dam
440956
441615
660
-
PROTEIN:site-specific DNA methylase
PAM396
ssb
442093
442422
330
-
PROTEIN:single-stranded DNA-binding protein
PAM397
PAM397
442897
443292
396
-
PROTEIN:hypothetical protein
PAM398
PAM398
443637
443972
336
+
PROTEIN:hypothetical protein
PAM399
PAM399
444553
444969
417
+
PROTEIN:hypothetical protein
PAM400
PAM400
444994
445443
450
+
PROTEIN:hypothetical protein
PAM401
PAM401
445471
445902
432
+
PROTEIN:hypothetical protein
PAM402
himA
445899
446189
291
+
PROTEIN:nucleoid DNA-binding protein
PAM403
hflB
446232
448592
2361
+
PROTEIN:ATP-dependent Zn protease
PAM404
PAM404
448608
448931
324
+
PROTEIN:hypothetical protein
PAM405
PAM405
449258
449716
459
+
PROTEIN:hypothetical protein
PAM406
tra5
450732
451340
609
-
PROTEIN:putative transposase
PAM407
PAM407
451784
452338
555
-
PROTEIN:hypothetical protein
PAM408
rpoD
453299
453898
600
+
PROTEIN:DNA-directed RNA polymerase sigma subunit
PAM409
dam
454082
454966
885
+
PROTEIN:site-specific DNA methylase
PAM410
ssb
455138
455473
336
+
PROTEIN:single-stranded DNA-binding protein
PAM411
PAM411
457519
458022
504
-
PROTEIN:hypothetical protein
PAM412
PAM412
458035
458352
318
-
PROTEIN:hypothetical protein
PAM413
uvrD
458850
461282
2433
-
PROTEIN:ATP-dependent DNA helicase
PAM414
PAM414
462170
463150
981
-
PROTEIN:hypothetical protein
PAM415
PAM415
463182
463592
411
-
PROTEIN:hypothetical protein
PAM416
PAM416
463872
464291
420
-
PROTEIN:hypothetical protein
PAM417
PAM417
464516
464833
318
-
PROTEIN:hypothetical protein
PAM418
PAM418
465284
466435
1152
-
PROTEIN:hypothetical protein
PAM419
PAM419
466441
467253
813
-
PROTEIN:hypothetical protein
PAM420
himA
468176
468508
333
-
PROTEIN:nucleoid DNA-binding protein
PAM421
ssb
468566
468880
315
-
PROTEIN:single-stranded DNA-binding protein
PAM422
fliA
468874
469521
648
-
PROTEIN:DNA-directed RNA polymerase specialized si
PAM423
PAM423
469779
470087
309
+
PROTEIN:hypothetical protein
PAM424
PAM424
470351
471049
699
+
PROTEIN:hypothetical protein
PAM425
PAM425
471408
471896
489
+
PROTEIN:hypothetical protein
PAM426
hflB
471906
473492
1587
+
PROTEIN:ATP-dependent Zn protease
PAM427
fliA
473533
474201
669
+
PROTEIN:DNA-directed RNA polymerase specialized si
PAM428
dnaB
474466
475764
1299
+
PROTEIN:replicative DNA helicase
PAM429
malK
476118
476294
177
+
PROTEIN:ABC-type sugar transport systems, ATPase c
PAM430
tmk
476312
476902
591
+
PROTEIN:thymidylate kinase
PAM431
PAM431
476974
477486
513
+
PROTEIN:hypothetical protein
PAM432
uvrB
478646
480664
2019
-
PROTEIN:excinuclease ABC subunit B
PAM433
uvrC
481032
482417
1386
-
PROTEIN:nuclease subunit of the excinuclease compl
PAM434
pdxK
482970
483836
867
+
PROTEIN:pyridoxal/pyridoxine/pyridoxamine kinase
PAM435
nfnB
483960
484565
606
-
PROTEIN:nitroreductase
PAM436
PAM436
485212
485730
519
+
PROTEIN:hypothetical protein
PAM437
PAM437
485736
485912
177
+
PROTEIN:hypothetical protein
PAM438
lig
486050
488065
2016
+
PROTEIN:NAD-dependent DNA ligase
PAM439
PAM439
488140
489210
1071
+
PROTEIN:hypothetical protein
PAM440
acpS
489182
489565
384
+
PROTEIN:phosphopantetheinyl transferase
PAM441
hcaD
489710
491053
1344
+
PROTEIN:uncharacterized NAD-dependent dehydrogenas
PAM442
sodA
491244
491852
609
+
PROTEIN:superoxide dismutase
PAM443
nusB
491859
492308
450
+
PROTEIN:transcription termination factor
PAM444
PAM444
492750
493565
816
+
PROTEIN:hypothetical protein
PAM445
lepA
494097
495914
1818
+
PROTEIN:GTP-binding protein LepA
PAM446
PAM446
496013
496423
411
-
PROTEIN:hypothetical protein
PAM447
tldD
496731
499487
2757
+
PROTEIN:hypothetical protein
PAM448
lon
499642
502017
2376
-
PROTEIN:ATP-dependent Lon protease
PAM449
tig
502104
503396
1293
-
PROTEIN:FKBP-type peptidyl-prolyl cis-trans isomer
PAM450
uvrA
504067
506985
2919
-
PROTEIN:excinuclease ATPase subunit
PAM451
PAM451
507953
508306
354
+
PROTEIN:hypothetical protein
PAM452
PAM452
508313
508711
399
+
PROTEIN:hypothetical protein
PAM453
srmB
509237
510310
1074
+
PROTEIN:superfamily II DNA/RNA helicase
PAM454
nfo
510833
511711
879
+
PROTEIN:endonuclease IV
PAM455
argS
512605
514278
1674
+
PROTEIN:arginyl-tRNA synthetase
PAM456
artM
514540
516333
1794
+
PROTEIN:ABC-type amino acid transport system, perm
PAM457
artI
516356
518185
1830
+
PROTEIN:ABC-type amino acid transport system, peri
PAM458
PAM458
520062
520499
438
-
PROTEIN:hypothetical protein
PAM459
PAM459
520499
521515
1017
-
PROTEIN:hypothetical protein
PAM460
PAM460
521705
522034
330
-
PROTEIN:hypothetical protein
PAM461
PAM461
522455
522742
288
-
PROTEIN:hypothetical protein
PAM462
PAM462
522937
523254
318
-
PROTEIN:hypothetical protein
PAM463
PAM463
524180
524632
453
+
PROTEIN:hypothetical protein
PAM464
artM
524635
525021
387
+
PROTEIN:ABC-type amino acid transport system, perm
PAMt13
Leu-tRNA
525428
525509
82
+
RNA:Leu tRNA
PAM465
polC
525667
530382
4716
+
PROTEIN:DNA polymerase III alpha subunit
PAM466
trpS
530461
531498
1038
+
PROTEIN:tryptophanyl-tRNA synthetase
PAM467
iscU
531552
531995
444
-
PROTEIN:nifU-like protein
PAM468
csdB
532010
533215
1206
-
PROTEIN:selenocysteine lyase
PAM469
tyrS
533292
534533
1242
-
PROTEIN:tyrosyl-tRNA synthetase
PAM470
rplS
534718
535074
357
-
PROTEIN:50S ribosomal protein L19
PAM471
trmD
535116
535844
729
-
PROTEIN:tRNA-(guanine-N1)-methyltransferase
PAM472
rpsP
535904
536167
264
-
PROTEIN:30S ribosomal protein S16
PAM473
prfB
536618
537727
1110
-
PROTEIN:protein chain release factor B
PAM474
secA
537731
540238
2508
-
PROTEIN:preprotein translocase subunit SecA
PAM475
PAM475
540618
540719
102
+
PROTEIN:hypothetical protein
PAM476
mutT
540857
541366
510
-
PROTEIN:MutT/nudix family protein
PAM477
PAM477
542120
542692
573
-
PROTEIN:hypothetical protein
PAM478
PAM478
544178
544810
633
-
PROTEIN:hypothetical protein
PAM479
PAM479
544833
545696
864
-
PROTEIN:hypothetical protein
PAM480
hflB
545871
546923
1053
-
PROTEIN:ATP-dependent Zn protease
PAM481
PAM481
548249
548740
492
-
PROTEIN:hypothetical protein
PAM482
PAM482
548948
549406
459
-
PROTEIN:hypothetical protein
PAM483
PAM483
549445
550083
639
-
PROTEIN:hypothetical protein
PAM484
PAM484
550810
551415
606
+
PROTEIN:hypothetical protein
PAM485
PAM485
551560
552072
513
-
PROTEIN:hypothetical protein
PAM486
PAM486
553541
554116
576
+
PROTEIN:hypothetical protein
PAM487
artM
554510
555208
699
+
PROTEIN:ABC-type amino acid transport system, perm
PAM488
glnQ
555201
555947
747
+
PROTEIN:ABC-type polar amino acid transport system
PAM489
artI
556151
557113
963
+
PROTEIN:ABC-type amino acid transport system, peri
PAM490
artM
557116
557850
735
+
PROTEIN:ABC-type amino acid transport system, perm
PAM491
PAM491
558137
558442
306
+
PROTEIN:hypothetical protein
PAMt14
Phe-tRNA
559186
559258
73
-
RNA:Phe tRNA
PAMt15
Asp-tRNA
559264
559336
73
-
RNA:Asp tRNA
PAMt16
Met-tRNA
559345
559418
74
-
RNA:Met tRNA
PAMt17
Ser-tRNA
559439
559526
88
-
RNA:Ser tRNA
PAMt18
Met-tRNA
559537
559610
74
-
RNA:Met tRNA
PAMt19
Met-tRNA
559615
559688
74
-
RNA:Met tRNA
PAMt20
Ala-tRNA
559730
559802
73
-
RNA:Ala tRNA
PAMt21
Leu-tRNA
559810
559892
83
-
RNA:Leu tRNA
PAMt22
Lys-tRNA
559962
560034
73
-
RNA:Lys tRNA
PAMt23
Thr-tRNA
560045
560117
73
-
RNA:Thr tRNA
PAMt24
Val-tRNA
560173
560245
73
-
RNA:Val tRNA
PAMr04
rrna
560271
560379
109
-
RNA:5S ribosomal RNA
PAMr05
rrna
560415
563498
3084
-
RNA:23S ribosomal RNA
PAM492
PAM492
560877
561518
642
+
PROTEIN:hypothetical protein
PAMt25
Ile-tRNA
563346
563419
74
-
RNA:Ile tRNA
PAMr06
rrna
563523
565057
1535
-
RNA:16S ribosomal RNA
PAM493
PAM493
565791
566372
582
-
PROTEIN:hypothetical protein
PAM494
artM
566709
566987
279
-
PROTEIN:ABC-type amino acid transport system, perm
PAM495
artI
567076
568083
1008
-
PROTEIN:ABC-type amino acid transport system, peri
PAM496
PAM496
568372
568701
330
-
PROTEIN:hypothetical protein
PAM497
PAM497
568918
569424
507
+
PROTEIN:hypothetical protein
PAM498
gyrB
569895
571910
2016
+
PROTEIN:DNA gyrase beta subunit
PAM499
gyrA
571995
574502
2508
+
PROTEIN:DNA gyrase alpha subunit
PAM500
PAM500
574597
575097
501
+
PROTEIN:hypothetical protein
PAM501
PAM501
575094
575807
714
+
PROTEIN:hypothetical protein
PAM502
PAM502
576161
577615
1455
+
PROTEIN:hypothetical protein
PAM503
PAM503
577774
577974
201
+
PROTEIN:hypothetical protein
PAM504
PAM504
578186
578641
456
-
PROTEIN:hypothetical protein
PAM505
uvrD
578686
581307
2622
-
PROTEIN:ATP-dependent DNA helicase
PAM506
PAM506
581488
582165
678
-
PROTEIN:hypothetical protein
PAM507
PAM507
582155
582646
492
-
PROTEIN:hypothetical protein
PAM508
PAM508
582678
583340
663
-
PROTEIN:hypothetical protein
PAM509
PAM509
583614
583787
174
-
PROTEIN:hypothetical protein
PAM510
PAM510
583982
584314
333
-
PROTEIN:hypothetical protein
PAM511
fliA
585219
585824
606
+
PROTEIN:DNA-directed RNA polymerase specialized si
PAM512
ssb
586056
586385
330
+
PROTEIN:single-stranded DNA-binding protein
PAM513
himA
586422
586712
291
+
PROTEIN:nucleoid DNA-binding protein
PAM514
PAM514
586755
588545
1791
+
PROTEIN:hypothetical protein
PAM515
PAM515
589580
590452
873
+
PROTEIN:hypothetical protein
PAM516
smc
591207
591551
345
+
PROTEIN:chromosome segregation ATPase-like protein
PAM517
PAM517
591617
592351
735
+
PROTEIN:hypothetical protein
PAM518
PAM518
592401
592808
408
+
PROTEIN:hypothetical protein
PAM519
PAM519
592842
593177
336
+
PROTEIN:hypothetical protein
PAM520
PAM520
593722
594372
651
+
PROTEIN:hypothetical protein
PAM521
tmk
594448
595062
615
+
PROTEIN:thymidylate kinase
PAM522
PAM522
595198
595809
612
+
PROTEIN:hypothetical protein
PAM523
dnaB
595814
597313
1500
+
PROTEIN:replicative DNA helicase
PAM524
dnaG
597324
598649
1326
+
PROTEIN:DNA primase
PAM525
PAM525
598669
599307
639
+
PROTEIN:hypothetical protein
PAM526
PAM526
599881
600339
459
+
PROTEIN:hypothetical protein
PAM527
uvrD
600552
603668
3117
-
PROTEIN:ATP-dependent DNA helicase
PAM528
PAM528
604104
604886
783
-
PROTEIN:hypothetical protein
PAM529
PAM529
604918
605223
306
-
PROTEIN:hypothetical protein
PAM530
PAM530
605213
605581
369
-
PROTEIN:hypothetical protein
PAM531
PAM531
606222
606554
333
-
PROTEIN:hypothetical protein
PAM532
PAM532
607026
608639
1614
-
PROTEIN:hypothetical protein
PAM533
PAM533
609057
609431
375
-
PROTEIN:hypothetical protein
PAM534
himA
609743
610075
333
-
PROTEIN:nucleoid DNA-binding protein
PAM535
ssb
610148
610462
315
-
PROTEIN:single-stranded DNA-binding protein
PAM536
fliA
610477
611163
687
-
PROTEIN:DNA-directed RNA polymerase specialized si
PAM537
PAM537
611215
611586
372
+
PROTEIN:hypothetical protein
PAM538
PAM538
611813
612178
366
+
PROTEIN:hypothetical protein
PAM539
PAM539
612245
612976
732
+
PROTEIN:hypothetical protein
PAM540
PAM540
613042
613419
378
+
PROTEIN:hypothetical protein
PAM541
PAM541
613440
614207
768
+
PROTEIN:hypothetical protein
PAM542
PAM542
614454
615020
567
+
PROTEIN:hypothetical protein
PAM543
PAM543
615553
616203
651
+
PROTEIN:hypothetical protein
PAM544
PAM544
616278
616658
381
+
PROTEIN:hypothetical protein
PAM545
PAM545
618240
618737
498
+
PROTEIN:hypothetical protein
PAM546
PAM546
619234
619710
477
+
PROTEIN:hypothetical protein
PAM547
tra5
620331
621260
930
-
PROTEIN:putative transposase
PAM548
PAM548
621979
622476
498
-
PROTEIN:hypothetical protein
PAM549
dnaG
622476
623801
1326
-
PROTEIN:DNA primase
PAM550
dnaB
623826
625322
1497
-
PROTEIN:replicative DNA helicase
PAM551
PAM551
625343
625948
606
-
PROTEIN:hypothetical protein
PAM552
PAM552
626338
626754
417
-
PROTEIN:hypothetical protein
PAM553
PAM553
626829
627191
363
-
PROTEIN:hypothetical protein
PAM554
PAM554
628185
628763
579
-
PROTEIN:hypothetical protein
PAM555
PAM555
629540
629872
333
+
PROTEIN:hypothetical protein
PAM556
PAM556
630067
630537
471
+
PROTEIN:hypothetical protein
PAM557
PAM557
630500
631174
675
+
PROTEIN:hypothetical protein
PAM558
PAM558
631206
632285
1080
+
PROTEIN:hypothetical protein
PAM559
uvrD
632510
635050
2541
+
PROTEIN:ATP-dependent DNA helicase
PAM560
PAM560
635173
635622
450
+
PROTEIN:hypothetical protein
PAM561
hflB
636023
637135
1113
-
PROTEIN:ATP-dependent Zn protease
PAM562
PAM562
637270
637800
531
-
PROTEIN:hypothetical protein
PAM563
himA
638113
638403
291
-
PROTEIN:nucleoid DNA-binding protein
PAM564
ssb
638584
638919
336
-
PROTEIN:single-stranded DNA-binding protein
PAM565
dam
639091
639975
885
-
PROTEIN:site-specific DNA methylase
PAM566
PAM566
640299
640535
237
-
PROTEIN:hypothetical protein
PAM567
tra5
642203
643132
930
-
PROTEIN:putative transposase
PAM568
PAM568
643764
644327
564
-
PROTEIN:hypothetical protein
PAM569
dnaG
644327
645652
1326
-
PROTEIN:DNA primase
PAM570
dnaB
645677
647173
1497
-
PROTEIN:replicative DNA helicase
PAM571
PAM571
647699
648418
720
+
PROTEIN:hypothetical protein
PAM572
dnaG
648430
649755
1326
+
PROTEIN:DNA primase
PAM573
PAM573
649896
650522
627
+
PROTEIN:hypothetical protein
PAM574
tra5
650962
651900
939
+
PROTEIN:putative transposase
PAM575
PAM575
652658
653392
735
+
PROTEIN:hypothetical protein
PAM576
PAM576
653458
654267
810
+
PROTEIN:hypothetical protein
PAM577
PAM577
654406
654894
489
+
PROTEIN:hypothetical protein
PAM578
PAM578
655687
656517
831
+
PROTEIN:hypothetical protein
PAM579
QRI7
656873
657574
702
-
PROTEIN:glycoprotein endopeptidase
PAM580
folK
657662
658177
516
-
PROTEIN:7,8-dihydro-6-hydroxymethylpterin- pyropho
PAM581
folP
658387
659268
882
-
PROTEIN:dihydropteroate synthase
PAM582
PAM582
659639
660238
600
-
PROTEIN:hypothetical protein
PAM583
degV
660457
661323
867
-
PROTEIN:hypothetical protein
PAM584
PAM584
661452
662243
792
-
PROTEIN:uncharacterized ACR
PAM585
mgtA
662433
665111
2679
-
PROTEIN:cation transport ATPase
PAM586
rpsD
665484
665933
450
-
PROTEIN:30S ribosomal protein S4
PAM587
PAM587
666680
667093
414
+
PROTEIN:hypothetical protein
PAM588
artM
667259
668989
1731
-
PROTEIN:ABC-type amino acid transport system, perm
PAM589
lysU
670622
672157
1536
+
PROTEIN:lysyl-tRNA synthetase class II
PAM590
PAM590
672584
672946
363
+
PROTEIN:hypothetical protein
PAM591
dnaE
673050
674927
1878
+
PROTEIN:DNA polymerase III alpha subunit
PAM592
PAM592
676183
676779
597
+
PROTEIN:hypothetical protein
PAM593
PAM593
676893
677672
780
+
PROTEIN:hypothetical protein
PAM594
asnB
677731
679407
1677
+
PROTEIN:asparagine synthetase B
PAM595
PAM595
679611
679964
354
+
PROTEIN:hypothetical protein
PAM596
pheS
680030
681064
1035
+
PROTEIN:phenylalanyl-tRNA synthetase alpha subunit
PAM597
PAM597
681030
681575
546
+
PROTEIN:hypothetical protein
PAM598
pheT
681568
683496
1929
+
PROTEIN:phenylalanyl-tRNA synthetase beta subunit
PAM599
phnL
683685
685313
1629
+
PROTEIN:ABC transporter, ATPase component
PAM600
acoA
685537
686628
1092
+
PROTEIN:thiamine pyrophosphate-dependent dehydroge
PAM601
acoB
686631
687605
975
+
PROTEIN:thiamine pyrophosphate-dependent dehydroge
PAM602
aceF
687929
689113
1185
+
PROTEIN:branched-chain alpha-keto acid dehydrogena
PAM603
lpd
689135
690508
1374
+
PROTEIN:fatty acid/phospholipid biosynthesis enzym
PAM604
PAM604
690877
691233
357
+
PROTEIN:hypothetical protein
PAM605
tatD
691571
692338
768
+
PROTEIN:Mg-dependent DNase
PAM606
PAM606
692433
692768
336
-
PROTEIN:hypothetical protein
PAM607
plsX
693444
694544
1101
+
PROTEIN:putative glycerol-3-phosphate acyltransfer
PAM608
rnc
694541
695257
717
+
PROTEIN:dsRNA-specific ribonuclease
PAM609
PAM609
695199
695882
684
+
PROTEIN:hypothetical protein
PAM610
PAM610
696009
696476
468
+
PROTEIN:hypothetical protein
PAM611
pyrG
696557
698179
1623
-
PROTEIN:CTP synthetase
PAM612
psd
698172
699170
999
-
PROTEIN:phosphatidylserine decarboxylase
PAM613
pssA
699183
699917
735
-
PROTEIN:phosphatidylserine synthase
PAM614
PAM614
700093
700602
510
-
PROTEIN:hypothetical protein
PAM615
PAM615
700803
701012
210
-
PROTEIN:hypothetical protein
PAM616
PAM616
701025
701519
495
-
PROTEIN:hypothetical protein
PAM617
dnaX
701516
702964
1449
-
PROTEIN:DNA polymerase III, gamma/tau subunit
PAM618
hsdR
704872
705471
600
+
PROTEIN:restriction enzyme type I helicase subunit
PAM619
hsdM
707482
707850
369
+
PROTEIN:type I restriction-modification system met
PAM620
glnS
709503
711212
1710
+
PROTEIN:glutaminyl-tRNA synthetase
PAM621
uvrD
711332
713575
2244
+
PROTEIN:ATP-dependent DNA helicase
PAM622
PAM622
713917
714495
579
+
PROTEIN:hypothetical protein
PAM623
rpsU
714724
714897
174
+
PROTEIN:30S ribosomal protein S21
PAM624
PAM624
715119
715559
441
+
PROTEIN:hypothetical protein
PAM625
era
715683
716570
888
+
PROTEIN:GTP-binding protein Era
PAM626
GRS1
716670
718028
1359
+
PROTEIN:glycyl-tRNA synthetase
PAM627
dnaG
718038
719852
1815
+
PROTEIN:DNA primase
PAM628
rpoD
719935
721317
1383
+
PROTEIN:DNA-directed RNA polymerase sigma subunit
PAM629
PAM629
721319
721762
444
+
PROTEIN:hypothetical protein
PAM630
hit
722036
722497
462
-
PROTEIN:diadenosine tetraphosphate hydrolase
PAM631
PAM631
722519
723511
993
-
PROTEIN:ribonuclease HII family 2
PAM632
PAM632
724063
724368
306
-
PROTEIN:hypothetical protein
PAM633
PAM633
725007
726698
1692
-
PROTEIN:hypothetical protein
PAM634
PAM634
726891
727697
807
+
PROTEIN:hypothetical protein
PAM635
PAM635
727828
727983
156
-
PROTEIN:hypothetical protein
PAMt26
Gly-tRNA
727848
727919
72
-
RNA:Gly tRNA
PAMt27
Pro-tRNA
727943
728016
74
-
RNA:Pro tRNA
PAMt28
Arg-tRNA
728044
728117
74
-
RNA:Arg tRNA
PAMt29
Glu-tRNA
728134
728206
73
-
RNA:Glu tRNA
PAM636
degV
728529
729392
864
-
PROTEIN:hypothetical protein
PAM637
PAM637
729728
731452
1725
-
PROTEIN:hypothetical protein
PAM638
PAM638
731545
731664
120
+
PROTEIN:hypothetical protein
PAM639
artM
732710
733468
759
-
PROTEIN:ABC-type amino acid transport system, perm
PAM640
PAM640
733781
734584
804
-
PROTEIN:hypothetical protein
PAM641
mdoB
734556
734930
375
-
PROTEIN:amino acid transporter, amino acid-binding
PAM642
tra5
735313
736251
939
-
PROTEIN:putative transposase
PAM643
PAM643
736666
737046
381
-
PROTEIN:hypothetical protein
PAM644
dnaG
737473
738705
1233
-
PROTEIN:DNA primase
PAM645
dnaB
738718
740211
1494
-
PROTEIN:replicative DNA helicase
PAM646
PAM646
740213
740836
624
-
PROTEIN:hypothetical protein
PAM647
PAM647
741256
741636
381
-
PROTEIN:hypothetical protein
PAM648
PAM648
741707
742345
639
-
PROTEIN:hypothetical protein
PAM649
PAM649
743119
743394
276
-
PROTEIN:hypothetical protein
PAM650
PAM650
743486
744181
696
-
PROTEIN:hypothetical protein
PAM651
PAM651
744248
744871
624
-
PROTEIN:hypothetical protein
PAM652
PAM652
745341
746201
861
-
PROTEIN:hypothetical protein
PAM653
PAM653
746981
748834
1854
-
PROTEIN:hypothetical protein
PAM654
himA
748906
749196
291
-
PROTEIN:nucleoid DNA-binding protein
PAM655
ssb
749326
749670
345
-
PROTEIN:single-stranded DNA-binding protein
PAM656
fliA
749933
750535
603
-
PROTEIN:DNA-directed RNA polymerase specialized si
PAM657
PAM657
750626
750940
315
-
PROTEIN:hypothetical protein
PAM658
hflB
751969
753765
1797
-
PROTEIN:ATP-dependent Zn protease
PAM659
potA
754427
755680
1254
+
PROTEIN:ABC-type spermidine/putrescine transport s
PAM660
potB
755674
756522
849
+
PROTEIN:ABC-type spermidine/putrescine transport s
PAM661
potC
756512
757516
1005
+
PROTEIN:ABC-type spermidine/putrescine transport s
PAM662
potD
757513
758739
1227
+
PROTEIN:spermidine/putrescine-binding periplasmic
PAM663
PAM663
758935
759948
1014
-
PROTEIN:hypothetical protein
PAM664
rpt1
760408
760851
444
-
PROTEIN:ATP-dependent 26S proteasome regulatory su
PAM665
PAM665
761746
763461
1716
+
PROTEIN:hypothetical protein
PAMt30
Leu-tRNA
763490
763572
83
+
RNA:Leu tRNA
PAM666
tra5
764214
765164
951
-
PROTEIN:putative transposase
PAM667
clpX
765736
766866
1131
+
PROTEIN:ATP-dependent protease Clp, ATPase subunit
PAM668
PAM668
766890
767249
360
+
PROTEIN:hypothetical protein
PAM669
PAM669
767348
767890
543
-
PROTEIN:hypothetical protein
PAM670
PAM670
767954
768355
402
-
PROTEIN:hypothetical protein
PAMt31
Gly-tRNA
769139
769210
72
-
RNA:Gly tRNA
PAMt32
Thr-tRNA
769233
769303
71
-
RNA:Thr tRNA
PAM671
cspC
769504
769728
225
+
PROTEIN:cold shock protein
PAM672
dnaC
770513
771331
819
-
PROTEIN:DNA replication protein
PAM673
dnaB
771414
772607
1194
-
PROTEIN:replication initiation/membrane attachment
PAM674
nei
772661
773491
831
-
PROTEIN:formamidopyrimidine-DNA glycosylase
PAM675
polA
773647
775089
1443
-
PROTEIN:DNA polymerase I
PAM676
exo
775265
776233
969
-
PROTEIN:5'-3' exonuclease
PAM677
PAM677
776341
777396
1056
-
PROTEIN:hypothetical protein
PAM678
ffh
777633
778913
1281
-
PROTEIN:signal recognition particle GTPase
PAM679
ftsY
779175
780218
1044
-
PROTEIN:signal recognition particle-docking protei
PAM680
gmk
780557
781078
522
-
PROTEIN:guanylate kinase
PAM681
PAM681
781416
781634
219
-
PROTEIN:hypothetical protein
PAM682
PAM682
782353
782931
579
-
PROTEIN:hypothetical protein
PAM683
tra5
783244
784191
948
+
PROTEIN:putative transposase
PAM684
PAM684
784596
785225
630
-
PROTEIN:hypothetical protein
PAM685
dnaG
785385
786710
1326
-
PROTEIN:DNA primase
PAM686
dnaB
786737
788236
1500
-
PROTEIN:replicative DNA helicase
PAM687
PAM687
788254
788865
612
-
PROTEIN:hypothetical protein
PAM688
tmk
789030
789659
630
-
PROTEIN:thymidylate kinase
PAM689
PAM689
789704
790018
315
-
PROTEIN:hypothetical protein
PAM690
PAM690
790457
790720
264
-
PROTEIN:hypothetical protein
PAM691
PAM691
790750
791547
798
-
PROTEIN:hypothetical protein
PAM692
PAM692
791628
793319
1692
-
PROTEIN:hypothetical protein
PAM693
smc
793291
794121
831
-
PROTEIN:chromosome segregation ATPase-like protein
PAM694
PAM694
794054
794995
942
-
PROTEIN:hypothetical protein
PAM695
hflB
795016
796524
1509
-
PROTEIN:ATP-dependent Zn protease
PAM696
PAM696
796765
797163
399
-
PROTEIN:hypothetical protein
PAM697
PAM697
797512
797955
444
-
PROTEIN:hypothetical protein
PAM698
himA
798267
798599
333
-
PROTEIN:nucleoid DNA-binding protein
PAM699
ssb
798672
798986
315
-
PROTEIN:single-stranded DNA-binding protein
PAM700
fliA
799001
799687
687
-
PROTEIN:DNA-directed RNA polymerase specialized si
PAM701
PAM701
799898
800134
237
-
PROTEIN:hypothetical protein
PAM702
rpoD
800136
800762
627
-
PROTEIN:DNA-directed RNA polymerase sigma subunit
PAM703
dnaJ
801973
802746
774
-
PROTEIN:molecular chaperone DnaJ
PAM704
dnaK
802898
804763
1866
-
PROTEIN:molecular chaperone DnaK
PAM705
grpE
804729
805472
744
-
PROTEIN:molecular chaperone GrpE
PAM706
hrcA
805694
806722
1029
-
PROTEIN:heat-inducible transcription repressor
PAM707
PAM707
808486
809133
648
+
PROTEIN:hypothetical protein
PAM708
PAM708
809411
809623
213
+
PROTEIN:hypothetical protein
PAM709
PAM709
810263
810463
201
+
PROTEIN:hypothetical protein
PAM710
PAM710
810537
810977
441
+
PROTEIN:hypothetical protein
PAM711
PAM711
811244
811837
594
+
PROTEIN:hypothetical protein
PAM712
PAM712
811921
812499
579
+
PROTEIN:hypothetical protein
PAM713
hflB
812722
813816
1095
+
PROTEIN:ATP-dependent Zn protease
PAM714
srmB
814483
816141
1659
+
PROTEIN:superfamily II DNA/RNA helicase
PAM715
PAM715
816273
816458
186
-
PROTEIN:hypothetical protein
PAM716
PAM716
816582
816848
267
-
PROTEIN:hypothetical protein
PAM717
PAM717
816915
817268
354
-
PROTEIN:hypothetical protein
PAM718
PAM718
817523
818182
660
-
PROTEIN:phosphatidylglycerophosphate synthase
PAM719
PAM719
818163
818318
156
-
PROTEIN:hypothetical protein
PAM720
citS
818800
819915
1116
-
PROTEIN:malate/citrate symporter
PAM721
sfcA
820334
821506
1173
-
PROTEIN:malic enzyme
PAM722
PAM722
822066
822236
171
+
PROTEIN:hypothetical protein
PAM723
PAM723
822461
823672
1212
-
PROTEIN:hypothetical protein
PAM724
PAM724
823693
823911
219
-
PROTEIN:hypothetical protein
PAM725
PAM725
824558
825049
492
-
PROTEIN:hypothetical protein
PAM726
ssb
825777
826106
330
+
PROTEIN:single-stranded DNA-binding protein
PAM727
hflB
826575
827948
1374
+
PROTEIN:ATP-dependent Zn protease
PAM728
PAM728
828160
830253
2094
-
PROTEIN:hypothetical protein
PAM729
PAM729
830614
831210
597
+
PROTEIN:hypothetical protein
PAM730
PAM730
831517
832770
1254
+
PROTEIN:HD superfamily phosphohydrolase
PAM731
ksgA
832877
833683
807
+
PROTEIN:dimethyladenosine transferase
PAM732
PAM732
833959
834258
300
+
PROTEIN:regulatory protein SpoVG
PAM733
zntA
834478
836478
2001
+
PROTEIN:cation transport ATPase
PAM734
norM
836678
838177
1500
-
PROTEIN:Na+-driven multidrug efflux pump
PAM735
PAM735
838300
839328
1029
-
PROTEIN:hypothetical protein
PAM736
rpoZ
839433
839630
198
-
PROTEIN:DNA-directed RNA polymerase subunit K/omeg
PAM737
gmk
839611
840249
639
-
PROTEIN:guanylate kinase
PAM738
leuS
840400
842865
2466
-
PROTEIN:leucyl-tRNA synthetase
PAM739
acpP
842969
843199
231
-
PROTEIN:acyl carrier protein
PAM740
frvX
843470
844534
1065
-
PROTEIN:endo-1,4-beta-glucanase-like protein
PAM741
PAM741
844521
845150
630
-
PROTEIN:hypothetical protein
PAM742
rplT
845289
845912
624
-
PROTEIN:50S ribosomal protein L20
PAM743
rpmI
845927
846133
207
-
PROTEIN:ribosomal protein L35
PAM744
infC
846266
846718
453
-
PROTEIN:translation initiation factor IF3
PAM745
thrS
847449
848375
927
-
PROTEIN:threonyl-tRNA synthetase
PAM746
PAM746
849379
850317
939
-
PROTEIN:hypothetical protein
PAM747
trmE
850416
851798
1383
-
PROTEIN:tRNA modification GTPase TrmE
PAM748
PAM748
852017
852985
969
-
PROTEIN:exopolyphosphatase-related protein
PAM749
ugpB
853020
854642
1623
-
PROTEIN:sugar-binding periplasmic protein
PAM750
ugpE
854626
855420
795
-
PROTEIN:sugar permease
PAM751
ugpA
855549
856490
942
-
PROTEIN:ABC-type sugar transport system, permease
PAM752
malK
856554
857597
1044
-
PROTEIN:ABC-type sugar transport system, ATPase co
PAM753
PAM753
857848
857964
117
-
PROTEIN:hypothetical protein
PAM754
asnC
858081
859601
1521
-
PROTEIN:asparaginyl-tRNA synthetase




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Copyright © 2010 [Molecular Biophysics Unit,IISC]. All rights reserved.
Last modified: 4/05/2010.