The Microbial Promoter Database
| NCBI ID : NC_008512 Version : NC_008512.1 Clade: Bacteria-Gammaproteobacteria Create Date: 21/10/06 Update Date: 28/07/08 | Genome size: 159662 nts %GC content: 16.56 %Coding (including protein and RNA): 97.35 No. of protein coding genes: 182 No. of RNA coding genes: 31 | No of Adenine(A) Bases : 66734 No of Guanine(G) Bases : 12946 No of Thymine(T) Bases : 66481 No of Cytosine(C) Bases : 13501 |
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| Gene ID | Gene name | Left end position |
Right end position |
Length | Transcription direction |
Gene Product |
|---|---|---|---|---|---|---|
| PROTEIN:tRNA modification GTPase | ||||||
| PROTEIN:tRNA uridine 5-carboxymethylaminomethyl mo | ||||||
| PROTEIN:F0F1-type ATP synthase A subunit | ||||||
| PROTEIN:F0F1-type ATP synthase C subunit | ||||||
| PROTEIN:putative F0F1-type ATP synthase B subunit | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:F0F1-type ATP synthase alpha subunit | ||||||
| PROTEIN:F0F1-type ATP synthase gamma subunit | ||||||
| PROTEIN:F0F1 ATP synthase subunit beta | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:ornithine carbamoyltransferase | ||||||
| PROTEIN:3-dehydroquinate dehydratase | ||||||
| PROTEIN:transketolase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:5,10-methylenetetrahydrofolate reductase | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:Ile tRNA | ||||||
| PROTEIN:succinyl-diaminopimelate desuccinylase | ||||||
| PROTEIN:tetrahydrodipicolinate N-succinyltransfera | ||||||
| PROTEIN:methionine aminopeptidase | ||||||
| PROTEIN:ribosomal protein S2 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:DNA polymerase III alpha subunit | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:5-methyltetrahydropteroyltriglutamate-- ho | ||||||
| PROTEIN:ribosomal protein L31 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:3-dehydroquinate synthase | ||||||
| PROTEIN:dihydroxy-acid dehydratase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:serine hydroxymethyltransferase | ||||||
| PROTEIN:putative ABC transporter permease componen | ||||||
| PROTEIN:putative ABC transporter ATP-binding compo | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:selenocysteine lyase | ||||||
| PROTEIN:putative tRNA(5-methylaminomethyl-2- thiou | ||||||
| PROTEIN:translation initiation factor IF-1 | ||||||
| RNA:Glu tRNA | ||||||
| RNA:Gly tRNA | ||||||
| RNA:Ser tRNA | ||||||
| PROTEIN:putative thioredoxin | ||||||
| PROTEIN:6-phosphogluconate dehydrogenase | ||||||
| RNA:Asn tRNA | ||||||
| RNA:Met tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:putative peptide chain release factor A | ||||||
| PROTEIN:aspartyl/glutamyl-tRNA amidotransferase B | ||||||
| PROTEIN:aspartyl/glutamyl-tRNA amidotransferase A | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:ribosomal protein L13 | ||||||
| PROTEIN:ribosomal protein S9 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:3-phosphoshikimate 1-carboxyvinyltransfera | ||||||
| PROTEIN:putative ribosomal protein S1 | ||||||
| PROTEIN:chaperonin GroEL | ||||||
| PROTEIN:chaperonin GroES | ||||||
| RNA:Val tRNA | ||||||
| RNA:Asp tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:putative replicative DNA helicase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:putative DNA primase | ||||||
| PROTEIN:putative RNA polymerase sigma factor rpoD | ||||||
| RNA:Ala tRNA | ||||||
| RNA:Phe tRNA | ||||||
| RNA:Gln tRNA | ||||||
| RNA:Thr tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:chaperone protein GrpE | ||||||
| PROTEIN:chaperone protein DnaK | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:dihydrodipicolinate reductase | ||||||
| PROTEIN:truncated carbamoylphosphate synthase smal | ||||||
| PROTEIN:truncated carbamoylphosphate synthase smal | ||||||
| PROTEIN:carbamoylphosphate synthase large subunit | ||||||
| RNA:Leu tRNA | ||||||
| PROTEIN:putative translation initiation factor IF- | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:tyrosyl-tRNA synthetase | ||||||
| PROTEIN:glutaminyl-tRNA synthetase | ||||||
| RNA:Pro tRNA | ||||||
| RNA:Arg tRNA | ||||||
| RNA:His tRNA | ||||||
| PROTEIN:ATP-dependent Clp protease proteolytic sub | ||||||
| PROTEIN:ATP-dependent protease ATP-binding subunit | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:aspartyl-tRNA synthetase | ||||||
| RNA:Ser tRNA | ||||||
| PROTEIN:ribulose-phosphate 3-epimerase | ||||||
| PROTEIN:bifunctional proline dehydrogenase/pyrroli | ||||||
| PROTEIN:2-isopropylmalate synthase | ||||||
| PROTEIN:chorismate synthase | ||||||
| PROTEIN:3-isopropylmalate dehydratase large subuni | ||||||
| PROTEIN:3-isopropylmalate dehydratase small subuni | ||||||
| PROTEIN:3-isopropylmalate dehydrogenase | ||||||
| PROTEIN:aspartate-semialdehyde dehydrogenase | ||||||
| PROTEIN:seryl-tRNA synthetase | ||||||
| RNA:Leu tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:DNA polymerase III epsilon subunit | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:putative phenylalanyl-tRNA synthetase alph | ||||||
| PROTEIN:ribosomal protein L20 | ||||||
| PROTEIN:translation initiation factor IF-3 | ||||||
| PROTEIN:superoxide dismutase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:phospho-2-dehydro-3-deoxyheptonate aldolas | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:leucyl-tRNA synthetase | ||||||
| PROTEIN:succinyl-CoA synthetase alpha subunit | ||||||
| PROTEIN:succinyl-CoA synthetase beta subunit | ||||||
| PROTEIN:putative glutamyl-tRNA synthetase | ||||||
| RNA:Met tRNA | ||||||
| PROTEIN:methionyl-tRNA synthetase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:argininosuccinate synthase | ||||||
| RNA:Cys tRNA | ||||||
| RNA:Leu tRNA | ||||||
| PROTEIN:dihydrodipicolinate synthase | ||||||
| RNA:Lys tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:malate:quinone oxidoreductase | ||||||
| RNA:Arg tRNA | ||||||
| RNA:Ser tRNA | ||||||
| PROTEIN:aspartokinase | ||||||
| PROTEIN:putative alanyl-tRNA synthetase | ||||||
| PROTEIN:RecA recombinase | ||||||
| PROTEIN:valyl-tRNA synthetase | ||||||
| PROTEIN:alkyl hydroperoxide reductase | ||||||
| PROTEIN:transaldolase | ||||||
| RNA:5S ribosomal RNA | ||||||
| RNA:23S ribosomal RNA | ||||||
| RNA:16S ribosomal RNA | ||||||
| PROTEIN:tryptophanyl-tRNA synthetase | ||||||
| PROTEIN:ribosomal protein L33 | ||||||
| PROTEIN:ribosomal protein L28 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:lysyl-tRNA synthetase | ||||||
| PROTEIN:peptide chain release factor B | ||||||
| PROTEIN:threonine synthase | ||||||
| PROTEIN:homoserine dehydrogenase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:ribosomal protein S16 | ||||||
| RNA:Met tRNA | ||||||
| PROTEIN:ketol-acid reductoisomerase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:acetolactate synthase large subunit | ||||||
| PROTEIN:ribosomal large subunit pseudouridine synt | ||||||
| PROTEIN:isoleucyl-tRNA synthetase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:putative GTPase | ||||||
| PROTEIN:50S ribosomal protein L27 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:RNA polymerase alpha subunit | ||||||
| PROTEIN:ribosomal protein S4 | ||||||
| PROTEIN:30S ribosomal protein S11 | ||||||
| PROTEIN:ribosomal protein S13 | ||||||
| PROTEIN:ribosomal protein L36 | ||||||
| PROTEIN:putative ribosomal protein L15 | ||||||
| PROTEIN:ribosomal protein S5 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:ribosomal protein L6 | ||||||
| PROTEIN:ribosomal protein S8 | ||||||
| PROTEIN:ribosomal protein S14 | ||||||
| PROTEIN:ribosomal protein L5 | ||||||
| PROTEIN:ribosomal protein L14 | ||||||
| PROTEIN:ribosomal protein S17 | ||||||
| PROTEIN:50S ribosomal protein L16 | ||||||
| PROTEIN:ribosomal protein S3 | ||||||
| PROTEIN:putative ribosomal protein L22 | ||||||
| PROTEIN:ribosomal protein S19 | ||||||
| PROTEIN:50S ribosomal protein L2 | ||||||
| PROTEIN:ribosomal protein L4 | ||||||
| PROTEIN:ribosomal protein L3 | ||||||
| PROTEIN:ribosomal protein S10 | ||||||
| PROTEIN:elongation factor Tu | ||||||
| PROTEIN:elongation factor G | ||||||
| PROTEIN:30S ribosomal protein S7 | ||||||
| PROTEIN:30S ribosomal protein S12 | ||||||
| PROTEIN:RNA polymerase beta' subunit | ||||||
| PROTEIN:RNA polymerase beta subunit | ||||||
| PROTEIN:ribosomal protein L7/L12 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:ribosomal protein L11 | ||||||
| RNA:Trp tRNA | ||||||
| RNA:Gly tRNA | ||||||
| RNA:Tyr tRNA | ||||||
| PROTEIN:putative cytochrome O ubiquinol oxidase su | ||||||
| PROTEIN:cytochrome O ubiquinol oxidase subunit III | ||||||
| PROTEIN:cytochrome O ubiquinol oxidase subunit I | ||||||
| PROTEIN:cytochrome O ubiquinol oxidase subunit II | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:branched-chain amino acid aminotransferase | ||||||
| PROTEIN:histidyl-tRNA synthetase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:peptide deformylase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:diaminopimelate decarboxylase | ||||||
| PROTEIN:diaminopimelate epimerase | ||||||
| PROTEIN:glycyl-tRNA synthetase alpha subunit | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:cold shock protein | ||||||
| PROTEIN:hypothetical protein |
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Last modified: 4/05/2010.