Genome Information
Microbial Genomes

Total number of Microbial genomes available in PromBase: 913

Data downloaded from ftp://ftp.ncbi.nlm.nih.gov/genome/Bacteria/ on 23/3/2009



Genomic details for Ureaplasma parvum serovar 3 str. ATCC 27815 (NC_010503)


NCBI ID : NC_010503
Version : NC_010503.1
Clade: Bacteria-Firmicutes
Create Date: 24/03/08
Update Date: 30/07/08
Genome size: 751679 nts
%GC content: 25.5
%Coding (including protein and RNA): 92.26
No. of protein coding genes: 609
No. of RNA coding genes: 32
No of Adenine(A) Bases : 280424
No of Guanine(G) Bases : 97300
No of Thymine(T) Bases : 279603
No of Cytosine(C) Bases : 94352



Analysis of nucleotide composition and structural properties in promoter regions of protein coding genes





Gene table for NC_010503
No. of Protein coding genes : 609
No. of RNA coding genes : 32

No. of overlapping genes in this genome : 162
Click here to download overlapping gene details


Gene ID Gene name Left end
position
Right end
position
Length Transcription
direction
Gene Product
UPA3_0001
dnaA
27
1400
1374
+
PROTEIN:chromosomal replication initiator protein
UPA3_0002
rpmE
1541
1828
288
+
PROTEIN:ribosomal protein L31
UPA3_0003
prfA
1961
3040
1080
+
PROTEIN:peptide chain release factor 1
UPA3_0004
UPA3_0004
3040
3912
873
+
PROTEIN:HemK family methyltransferase
UPA3_0005
UPA3_0005
3899
4453
555
+
PROTEIN:hypothetical protein
UPA3_0006
UPA3_0006
4457
4921
465
+
PROTEIN:RpiB/LacA/LacB family sugar-phosphate isom
UPA3_0007
UPA3_0007
5017
5577
561
+
PROTEIN:hypothetical protein
UPA3_0008
UPA3_0008
5580
6056
477
+
PROTEIN:hypothetical protein
UPA3_0009
mgtE
6201
7823
1623
+
PROTEIN:magnesium transporter
UPA3_0010
UPA3_0010
7980
8480
501
+
PROTEIN:50S ribosomal protein L10
UPA3_0011
rplL
8505
8870
366
+
PROTEIN:ribosomal protein L7/L12
UPA3_0012
UPA3_0012
9095
10645
1551
-
PROTEIN:hypothetical protein
UPA3_0013
UPA3_0013
11031
11960
930
-
PROTEIN:ribose/galactose ABC transporter
UPA3_0014
UPA3_0014
11960
14170
2211
-
PROTEIN:ribose/galactose ABC transporter
UPA3_0015
UPA3_0015
14173
15780
1608
-
PROTEIN:methylgalactoside permease ATP-binding pro
UPA3_0016
UPA3_0016
15836
17410
1575
-
PROTEIN:hypothetical protein
UPA3_0017
UPA3_0017
17581
18378
798
-
PROTEIN:TatD family hydrolase
UPA3_0018
trmE
18380
19696
1317
-
PROTEIN:tRNA modification GTPase TrmE
UPA3_0019
UPA3_0019
19699
20493
795
-
PROTEIN:DNA polymerase III delta subunit
UPA3_0020
tmk
20494
21186
693
-
PROTEIN:thymidylate kinase
UPA3_0021
UPA3_0021
21167
22030
864
-
PROTEIN:triacylglycerol lipase
UPA3_0022
UPA3_0022
22136
23158
1023
-
PROTEIN:ferrichrome ABC transporter
UPA3_0023
UPA3_0023
23159
24172
1014
-
PROTEIN:ferrichrome ABC transporter
UPA3_0024
UPA3_0024
24201
25601
1401
-
PROTEIN:putative ABC substrate-binding protein - i
UPA3_0025
UPA3_0025
25637
26740
1104
-
PROTEIN:ferrichrome ABC transporter
UPA3_0026
UPA3_0026
26907
27956
1050
-
PROTEIN:30S ribosomal protein S2
UPA3_0027
UPA3_0027
28056
29027
972
-
PROTEIN:putative ABC substrate-binding protein - i
UPA3_0028
UPA3_0028
29042
29788
747
-
PROTEIN:putative ABC substrate-binding protein - i
UPA3_0029
UPA3_0029
29794
31914
2121
-
PROTEIN:S1 RNA-binding domain-containing protein
UPA3_0030
UPA3_0030
32024
34267
2244
+
PROTEIN:hypothetical protein
UPA3_0031
UPA3_0031
34662
35426
765
+
PROTEIN:hypothetical protein
UPA3_0032
UPA3_0032
35518
36045
528
-
PROTEIN:hypothetical protein
UPA3_0033
UPA3_0033
36053
36526
474
-
PROTEIN:hypothetical protein
UPA3_0034
UPA3_0034
36576
37643
1068
-
PROTEIN:AAA domain-contain protein
UPA3_0035
UPA3_0035
37747
38487
741
-
PROTEIN:hypothetical protein
UPA3_0036
UPA3_0036
38740
39573
834
-
PROTEIN:hypothetical protein
UPA3_0037
UPA3_0037
40361
41749
1389
+
PROTEIN:AAA domain-contain protein
UPA3_0038
gidA
41825
43669
1845
+
PROTEIN:tRNA uridine 5-carboxymethylaminomethyl mo
UPA3_0039
gidB
43662
44372
711
+
PROTEIN:methyltransferase GidB
UPA3_0040
UPA3_0040
44395
44757
363
+
PROTEIN:PQ loop repeat-containing protein
UPA3_0041
UPA3_0041
44757
45173
417
+
PROTEIN:hypothetical protein
UPA3_0042
UPA3_0042
45340
47856
2517
+
PROTEIN:lipoprotein
UPA3_0043
UPA3_0043
47879
50227
2349
+
PROTEIN:hypothetical protein
UPA3_0044
UPA3_0044
50258
52762
2505
+
PROTEIN:putative lipoprotein
UPA3_0045
UPA3_0045
52799
55174
2376
+
PROTEIN:hypothetical protein
UPA3_0046
UPA3_0046
55189
57792
2604
+
PROTEIN:putative lipoprotein
UPA3_0047
UPA3_0047
57825
59312
1488
+
PROTEIN:hypothetical protein
UPA3_0048
UPA3_0048
59299
59814
516
+
PROTEIN:hypothetical protein
UPA3_0049
UPA3_0049
59817
60731
915
+
PROTEIN:hypothetical protein
UPA3_0050
UPA3_0050
60721
61200
480
+
PROTEIN:hypothetical protein
UPA3_0051
UPA3_0051
61190
63355
2166
+
PROTEIN:hypothetical protein
UPA3_0052
UPA3_0052
63371
64906
1536
+
PROTEIN:ATP synthase subunit alpha 2
UPA3_0053
UPA3_0053
64906
66270
1365
+
PROTEIN:ATP synthase F1 subunit beta
UPA3_0054
UPA3_0054
66535
69951
3417
+
PROTEIN:hypothetical protein
UPA3_0055
UPA3_0055
70046
70270
225
+
PROTEIN:hypothetical protein
UPA3_0056
rnr
70271
72436
2166
+
PROTEIN:ribonuclease R
UPA3_0057
smpB
72636
73061
426
+
PROTEIN:SsrA-binding protein
UPA3_0058
UPA3_0058
73081
74820
1740
+
PROTEIN:transport ATP-binding protein
UPA3_0059
UPA3_0059
74795
76591
1797
+
PROTEIN:transport ATP-binding protein
UPA3_0060
UPA3_0060
76651
77445
795
+
PROTEIN:hypothetical protein
UPA3_0061
lysS
77555
79036
1482
+
PROTEIN:lysyl-tRNA synthetase
UPA3_0062
UPA3_0062
79324
79800
477
-
PROTEIN:nucleoside 2-deoxyribosyltransferase super
UPA3_0063
UPA3_0063
79968
80234
267
-
PROTEIN:hypothetical protein
UPA3_0064
pepF1
80259
82085
1827
-
PROTEIN:oligoendopeptidase F
UPA3_0065
UPA3_0065
82173
83054
882
+
PROTEIN:phosphotransacetylase
UPA3_0066
UPA3_0066
83101
83715
615
-
PROTEIN:hypothetical protein
UPA3_0067
UPA3_0067
83753
84409
657
-
PROTEIN:hypothetical protein
UPA3_0068
UPA3_0068
84500
85375
876
-
PROTEIN:iron(III) dicitrate transport ATP-binding
UPA3_0069
UPA3_0069
85380
86450
1071
-
PROTEIN:hemin transport system permease
UPA3_0070
UPA3_0070
86469
88436
1968
-
PROTEIN:putative ABC substrate-binding protein - i
UPA3_0071
UPA3_0071
88669
89997
1329
+
PROTEIN:hemolysin
UPA3_0072
UPA3_0072
90015
91007
993
-
PROTEIN:hypothetical protein
UPA3_0073
trxB
90973
91902
930
-
PROTEIN:thioredoxin-disulfide reductase
UPA3_0074
lgt
91921
92928
1008
-
PROTEIN:prolipoprotein diacylglyceryl transferase
UPA3_0075
hprK
92929
93855
927
-
PROTEIN:HPr(Ser) kinase/phosphatase
UPA3_0076
tilS
93870
94862
993
-
PROTEIN:tRNA(Ile)-lysidine synthetase
UPA3_0077
pth
94834
95394
561
-
PROTEIN:peptidyl-tRNA hydrolase
UPA3_0078
dnaN
95616
96755
1140
+
PROTEIN:DNA polymerase III, beta subunit
UPA3_0079
yaaA
96893
97111
219
+
PROTEIN:S4 domain-containing protein YaaA
UPA3_0080
gyrB
97123
99075
1953
+
PROTEIN:DNA gyrase, B subunit
UPA3_0081
gyrA
99097
101619
2523
+
PROTEIN:DNA gyrase, A subunit
UPA3_0082
UPA3_0082
101727
102197
471
+
PROTEIN:competence/damage inducible protein CinA
UPA3_0083
recA
102236
103240
1005
+
PROTEIN:protein RecA
UPA3_0084
UPA3_0084
103272
104693
1422
+
PROTEIN:HDOD domain-contain protein
UPA3_0085
UPA3_0085
104720
104875
156
-
PROTEIN:hypothetical protein
UPA3_0086
UPA3_0086
104892
105590
699
-
PROTEIN:deoxyguanosine kinase
UPA3_0087
UPA3_0087
105788
107581
1794
+
PROTEIN:DNA polymerase III subunits gamma and tau
UPA3_0088
UPA3_0088
107589
107888
300
+
PROTEIN:hypothetical protein
UPA3_0089
UPA3_0089
107897
108502
606
+
PROTEIN:recombination protein RecR
UPA3_0090
UPA3_0090
108584
108826
243
+
PROTEIN:hypothetical protein
UPA3_0091
UPA3_0091
108923
110626
1704
+
PROTEIN:hypothetical protein
UPA3_0092
ffh
111242
112588
1347
+
PROTEIN:signal recognition particle protein
UPA3_0093
UPA3_0093
112800
114587
1788
+
PROTEIN:hypothetical protein
UPA3_0094
UPA3_0094
114587
115297
711
+
PROTEIN:ABC transporter
UPA3_0095
UPA3_0095
115419
118583
3165
+
PROTEIN:putative lipoprotein
UPA3_0096
UPA3_0096
118730
118858
129
-
PROTEIN:hypothetical protein
UPA3_0097
UPA3_0097
118970
119119
150
-
PROTEIN:hypothetical protein
UPA3_0098
hsdR
120188
123325
3138
-
PROTEIN:type I site-specific deoxyribonuclease, Hs
UPA3_0099
UPA3_0099
123346
123867
522
-
PROTEIN:type I restriction modification DNA specif
UPA3_0100
UPA3_0100
124005
124214
210
-
PROTEIN:hypothetical protein
UPA3_0101
hsdM
124347
125393
1047
+
PROTEIN:type I restriction-modification system, M
UPA3_0102
UPA3_0102
125397
126302
906
+
PROTEIN:type I restriction modification DNA specif
UPA3_0103
UPA3_0103
126341
126904
564
+
PROTEIN:hypothetical protein
UPA3_0104
UPA3_0104
126942
127508
567
-
PROTEIN:hypothetical protein
UPA3_0105
uvrA
127734
130565
2832
+
PROTEIN:excinuclease ABC, A subunit
UPA3_0106
UPA3_0106
130570
132234
1665
+
PROTEIN:putative lipoprotein
UPA3_0107
hpt
132261
132881
621
+
PROTEIN:hypoxanthine phosphoribosyltransferase
UPA3_0108
UPA3_0108
132886
135051
2166
+
PROTEIN:ATP-dependent zinc metallopeptidase - cell
UPA3_0109
serS
135162
136418
1257
+
PROTEIN:seryl-tRNA synthetase
UPA3_0110
UPA3_0110
136821
138380
1560
+
PROTEIN:spermidine/putrescine transport ATP-bindin
UPA3_0111
UPA3_0111
138364
139371
1008
+
PROTEIN:spermidine/putrescine transport system per
UPA3_0112
UPA3_0112
139358
140212
855
+
PROTEIN:spermidine/putrescine transport system per
UPA3_0113
UPA3_0113
140216
142252
2037
+
PROTEIN:putative lipoprotein
UPA3_0114
UPA3_0114
142350
142952
603
+
PROTEIN:hypothetical protein
UPA3_0115
UPA3_0115
143015
144142
1128
+
PROTEIN:hypothetical protein
UPA3_0116
UPA3_0116
144166
145113
948
+
PROTEIN:pseudouridine synthase
UPA3_0117
UPA3_0117
145357
146887
1531
+
RNA:small subunit ribosomal RNA
UPA3_0118
rrf
150153
150256
104
+
RNA:5S ribosomal RNA
UPA3_0119
folA
150399
150869
471
+
PROTEIN:dihydrofolate reductase
UPA3_0120
UPA3_0120
150877
151557
681
+
PROTEIN:phosphoglycolate phosphatase
UPA3_0121
UPA3_0121
151614
151687
74
+
RNA:Gly tRNA
UPA3_0122
upp
151752
152375
624
-
PROTEIN:uracil phosphoribosyltransferase
UPA3_0645
srpB
152494
152596
103
-
RNA:ncRNA
UPA3_0123
tyrS
152620
153867
1248
-
PROTEIN:tyrosyl-tRNA synthetase
UPA3_0124
UPA3_0124
154006
154908
903
+
PROTEIN:ABC transporter
UPA3_0125
secA
154925
157438
2514
+
PROTEIN:preprotein translocase, SecA subunit
UPA3_0126
uvrB
157441
159441
2001
+
PROTEIN:excinuclease ABC, B subunit
UPA3_0127
ligA
159525
161546
2022
+
PROTEIN:DNA ligase, NAD-dependent
UPA3_0128
UPA3_0128
161783
162478
696
+
PROTEIN:hypothetical protein
UPA3_0129
cysS
162492
163802
1311
+
PROTEIN:cysteinyl-tRNA synthetase
UPA3_0130
UPA3_0130
163804
164523
720
+
PROTEIN:RNA methyltransferase
UPA3_0131
UPA3_0131
164532
165716
1185
-
PROTEIN:putative lipoprotein
UPA3_0132
UPA3_0132
165728
168982
3255
-
PROTEIN:hypothetical protein
UPA3_0133
UPA3_0133
169109
169414
306
-
PROTEIN:hypothetical protein
UPA3_0134
atpC
169557
169967
411
-
PROTEIN:ATP synthase F1, epsilon subunit
UPA3_0135
atpD
169967
171361
1395
-
PROTEIN:ATP synthase F1, beta subunit
UPA3_0136
atpG
171388
172248
861
-
PROTEIN:ATP synthase F1, gamma subunit
UPA3_0137
UPA3_0137
172250
173056
807
-
PROTEIN:hypothetical protein
UPA3_0138
UPA3_0138
173056
175455
2400
-
PROTEIN:ATP synthase F1, alpha subunit
UPA3_0139
UPA3_0139
175458
175757
300
-
PROTEIN:ATP synthase delta subunit
UPA3_0140
atpH
175767
176306
540
-
PROTEIN:ATP synthase F1, delta subunit
UPA3_0141
atpF
176310
176927
618
-
PROTEIN:ATP synthase F0, B subunit
UPA3_0142
UPA3_0142
176996
177325
330
-
PROTEIN:ATP synthase F0, C subunit
UPA3_0143
atpB
177374
178201
828
-
PROTEIN:ATP synthase F0, A subunit
UPA3_0144
UPA3_0144
178227
178601
375
-
PROTEIN:hypothetical protein
UPA3_0145
UPA3_0145
178899
179609
711
+
PROTEIN:hypothetical protein
UPA3_0146
UPA3_0146
179671
182616
2946
+
PROTEIN:p115 protein
UPA3_0147
ftsY
182619
183674
1056
+
PROTEIN:signal recognition particle-docking protei
UPA3_0148
UPA3_0148
183664
183963
300
+
PROTEIN:YlxM family protein
UPA3_0149
UPA3_0149
184067
187834
3768
-
PROTEIN:hypothetical protein
UPA3_0150
UPA3_0150
188073
188151
79
+
RNA:Ile tRNA
UPA3_0151
UPA3_0151
188153
188230
78
+
RNA:Ala tRNA
UPA3_0152
UPA3_0152
188328
189002
675
-
PROTEIN:hypothetical protein
UPA3_0153
UPA3_0153
189063
189830
768
+
PROTEIN:integrase-recombinase protein
UPA3_0154
UPA3_0154
189820
190446
627
+
PROTEIN:hypothetical protein
UPA3_0155
UPA3_0155
190430
190603
174
+
PROTEIN:hypothetical protein
UPA3_0156
UPA3_0156
190605
190946
342
+
PROTEIN:hypothetical protein
UPA3_0157
UPA3_0157
190952
191248
297
+
PROTEIN:hypothetical protein
UPA3_0158
UPA3_0158
191270
191491
222
+
PROTEIN:hypothetical protein
UPA3_0159
UPA3_0159
191448
191630
183
+
PROTEIN:hypothetical protein
UPA3_0160
UPA3_0160
191623
191859
237
+
PROTEIN:hypothetical protein
UPA3_0161
UPA3_0161
191849
192184
336
+
PROTEIN:hypothetical protein
UPA3_0162
bet
192184
192840
657
+
PROTEIN:phage recombination protein Bet
UPA3_0163
UPA3_0163
192830
193519
690
+
PROTEIN:hypothetical protein
UPA3_0164
UPA3_0164
193509
193970
462
+
PROTEIN:hypothetical protein
UPA3_0165
UPA3_0165
193952
194629
678
+
PROTEIN:hypothetical protein
UPA3_0166
UPA3_0166
195533
195976
444
-
PROTEIN:hypothetical protein
UPA3_0167
UPA3_0167
195945
196490
546
-
PROTEIN:hypothetical protein
UPA3_0168
UPA3_0168
196480
196926
447
-
PROTEIN:hypothetical protein
UPA3_0169
UPA3_0169
196931
199174
2244
-
PROTEIN:hypothetical protein
UPA3_0170
UPA3_0170
199174
199851
678
-
PROTEIN:hypothetical protein
UPA3_0171
UPA3_0171
200012
201199
1188
-
PROTEIN:hypothetical protein
UPA3_0172
UPA3_0172
201215
201541
327
-
PROTEIN:hypothetical protein
UPA3_0173
UPA3_0173
201544
201912
369
-
PROTEIN:hypothetical protein
UPA3_0174
UPA3_0174
201923
205405
3483
-
PROTEIN:hypothetical protein
UPA3_0175
UPA3_0175
205398
206762
1365
-
PROTEIN:hypothetical protein
UPA3_0176
UPA3_0176
206752
208197
1446
-
PROTEIN:PBSX family phage terminase large subunit
UPA3_0177
UPA3_0177
208554
208997
444
-
PROTEIN:hypothetical protein
UPA3_0178
UPA3_0178
209441
210040
600
-
PROTEIN:hypothetical protein
UPA3_0179
UPA3_0179
210417
211916
1500
+
PROTEIN:putative lipoprotein
UPA3_0180
UPA3_0180
211971
214043
2073
-
PROTEIN:hypothetical protein
UPA3_0181
UPA3_0181
214119
214994
876
-
PROTEIN:HAD family hydrolase
UPA3_0182
trpS
215020
216021
1002
-
PROTEIN:tryptophanyl-tRNA synthetase
UPA3_0183
UPA3_0183
216146
216532
387
+
PROTEIN:hypothetical protein
UPA3_0184
UPA3_0184
216522
217334
813
+
PROTEIN:NAD(+)/NADH kinase family protein
UPA3_0185
UPA3_0185
217337
217717
381
+
PROTEIN:hypothetical protein
UPA3_0186
UPA3_0186
217798
218019
222
+
PROTEIN:hypothetical protein
UPA3_0187
UPA3_0187
218021
218500
480
-
PROTEIN:hypothetical protein
UPA3_0188
tpiA
218563
219279
717
+
PROTEIN:triosephosphate isomerase
UPA3_0189
gpmI
219296
220804
1509
+
PROTEIN:2,3-bisphosphoglycerate-independent phosph
UPA3_0190
UPA3_0190
220851
221726
876
+
PROTEIN:hypothetical protein
UPA3_0191
eno
221829
223151
1323
+
PROTEIN:phosphopyruvate hydratase
UPA3_0192
UPA3_0192
223120
224085
966
+
PROTEIN:phosphofructokinase family protein
UPA3_0193
pyk
224097
225521
1425
+
PROTEIN:pyruvate kinase
UPA3_0194
rpoB
225644
229948
4305
+
PROTEIN:DNA-directed RNA polymerase, beta subunit
UPA3_0195
rpoC
229970
233887
3918
+
PROTEIN:DNA-directed RNA polymerase, beta' subunit
UPA3_0196
UPA3_0196
234010
234531
522
+
PROTEIN:putative lipoprotein
UPA3_0197
UPA3_0197
234605
235459
855
-
PROTEIN:hypothetical protein
UPA3_0198
UPA3_0198
235604
236197
594
+
PROTEIN:tRNA-binding domain-containing protein
UPA3_0199
prs
236217
237209
993
+
PROTEIN:ribose-phosphate diphosphokinase
UPA3_0200
UPA3_0200
237216
237755
540
+
PROTEIN:primase-like protein
UPA3_0201
UPA3_0201
237759
238598
840
+
PROTEIN:hypothetical protein
UPA3_0202
UPA3_0202
238600
239826
1227
+
PROTEIN:AAA family ATPase
UPA3_0203
metG
239846
241411
1566
+
PROTEIN:methionyl-tRNA synthetase
UPA3_0204
UPA3_0204
241499
242671
1173
+
PROTEIN:hypothetical protein
UPA3_0205
UPA3_0205
242671
244866
2196
+
PROTEIN:phosphate transport system permease
UPA3_0206
pstB
244871
245860
990
+
PROTEIN:phosphate ABC transporter, ATP-binding pro
UPA3_0207
UPA3_0207
245884
246540
657
+
PROTEIN:PhoU family transcriptional regulator
UPA3_0208
UPA3_0208
246700
246924
225
+
PROTEIN:hypothetical protein
UPA3_0209
UPA3_0209
246928
249057
2130
+
PROTEIN:copper-transporting P-type ATPase
UPA3_0210
rpsO
249400
249669
270
-
PROTEIN:ribosomal protein S15
UPA3_0211
rnc
249780
250490
711
-
PROTEIN:ribonuclease III
UPA3_0212
plsX
250480
251475
996
-
PROTEIN:fatty acid/phospholipid synthesis protein
UPA3_0213
UPA3_0213
251480
253174
1695
-
PROTEIN:DAK2 domain-containing protein
UPA3_0214
UPA3_0214
253189
253455
267
-
PROTEIN:hypothetical protein
UPA3_0215
UPA3_0215
253560
254177
618
-
PROTEIN:hypothetical protein
UPA3_0216
rpmB
254296
254490
195
+
PROTEIN:ribosomal protein L28
UPA3_0217
rpmA
254913
255215
303
-
PROTEIN:ribosomal protein L27
UPA3_0218
UPA3_0218
255221
255529
309
-
PROTEIN:hypothetical protein
UPA3_0219
rplU
255535
255837
303
-
PROTEIN:ribosomal protein L21
UPA3_0220
gmk
256155
256730
576
+
PROTEIN:guanylate kinase
UPA3_0221
UPA3_0221
256711
257721
1011
+
PROTEIN:hypothetical protein
UPA3_0222
UPA3_0222
257725
258468
744
+
PROTEIN:protein phosphatase
UPA3_0223
UPA3_0223
258474
259634
1161
+
PROTEIN:serine/threonine kinase
UPA3_0224
rsgA
259637
260548
912
+
PROTEIN:ribosome small subunit-dependent GTPase A
UPA3_0225
UPA3_0225
260694
262217
1524
+
PROTEIN:ammonium transporter
UPA3_0226
UPA3_0226
262391
263947
1557
+
PROTEIN:ammonium transporter
UPA3_0227
UPA3_0227
264057
265343
1287
+
PROTEIN:hypothetical protein
UPA3_0228
fhs
265358
266923
1566
+
PROTEIN:formate--tetrahydrofolate ligase
UPA3_0229
UPA3_0229
267053
267805
753
+
PROTEIN:tyrosine recombinase XerC
UPA3_0230
UPA3_0230
267924
270365
2442
+
PROTEIN:amino acid antiporter
UPA3_0231
UPA3_0231
270543
271691
1149
+
PROTEIN:putative lipoprotein
UPA3_0232
UPA3_0232
271748
272065
318
+
PROTEIN:putative lipoprotein
UPA3_0233
UPA3_0233
272200
272517
318
+
PROTEIN:hypothetical protein
UPA3_0234
UPA3_0234
272692
274245
1554
+
PROTEIN:hypothetical protein
UPA3_0235
infC
274443
275006
564
+
PROTEIN:translation initiation factor IF-3
UPA3_0236
rpmI
275021
275215
195
+
PROTEIN:ribosomal protein L35
UPA3_0237
rplT
275270
275632
363
+
PROTEIN:ribosomal protein L20
UPA3_0238
rpsJ
275851
276156
306
+
PROTEIN:ribosomal protein S10
UPA3_0239
rplC
276181
276882
702
+
PROTEIN:ribosomal protein L3
UPA3_0240
rplD
276893
277528
636
+
PROTEIN:ribosomal protein L4/L1 family protein
UPA3_0241
rplW
277531
277848
318
+
PROTEIN:ribosomal protein L23
UPA3_0242
rplB
277902
278741
840
+
PROTEIN:ribosomal protein L2
UPA3_0243
rpsS
278762
279028
267
+
PROTEIN:ribosomal protein S19
UPA3_0244
UPA3_0244
279050
279985
936
+
PROTEIN:ribosomal protein L22
UPA3_0245
rpsC
280005
280778
774
+
PROTEIN:ribosomal protein S3
UPA3_0246
rplP
280793
281209
417
+
PROTEIN:ribosomal protein L16
UPA3_0247
rpmC
281209
281436
228
+
PROTEIN:ribosomal protein L29
UPA3_0248
rpsQ
281436
281690
255
+
PROTEIN:ribosomal protein S17
UPA3_0249
rplN
281710
282078
369
+
PROTEIN:ribosomal protein L14
UPA3_0250
rplX
282093
282425
333
+
PROTEIN:ribosomal protein L24
UPA3_0251
UPA3_0251
282442
282996
555
+
PROTEIN:50S ribosomal protein L5
UPA3_0252
rpsN
283000
283185
186
+
PROTEIN:ribosomal protein S14p/S29e
UPA3_0253
rpsH
283196
283594
399
+
PROTEIN:ribosomal protein S8
UPA3_0254
UPA3_0254
283603
284151
549
+
PROTEIN:50S ribosomal protein L6
UPA3_0255
rplR
284170
284535
366
+
PROTEIN:ribosomal protein L18
UPA3_0256
rpsE
284553
285164
612
+
PROTEIN:ribosomal protein S5
UPA3_0257
rplO
285181
285627
447
+
PROTEIN:ribosomal protein L15
UPA3_0258
UPA3_0258
285680
287095
1416
+
PROTEIN:preprotein translocase, SecY subunit
UPA3_0259
adk
287104
287745
642
+
PROTEIN:adenylate kinase
UPA3_0260
map
287770
288519
750
+
PROTEIN:methionine aminopeptidase, type I
UPA3_0261
infA
288547
288771
225
+
PROTEIN:translation initiation factor IF-1
UPA3_0262
rpmJ
288795
288908
114
+
PROTEIN:ribosomal protein L36
UPA3_0263
rpsM
288933
289331
399
+
PROTEIN:ribosomal protein S13p/S18e
UPA3_0264
rpsK
289353
289718
366
+
PROTEIN:ribosomal protein S11
UPA3_0265
rpoA
289755
290738
984
+
PROTEIN:DNA-directed RNA polymerase, alpha subunit
UPA3_0266
rplQ
290766
291125
360
+
PROTEIN:ribosomal protein L17
UPA3_0267
UPA3_0267
291392
293257
1866
+
PROTEIN:hypothetical protein
UPA3_0268
UPA3_0268
293264
294559
1296
+
PROTEIN:putative lipoprotein
UPA3_0269
UPA3_0269
294626
295033
408
+
PROTEIN:hypothetical protein
UPA3_0270
UPA3_0270
295023
295610
588
+
PROTEIN:hypothetical protein
UPA3_0271
UPA3_0271
295618
297402
1785
-
PROTEIN:putative lipoprotein
UPA3_0272
UPA3_0272
297613
300597
2985
-
PROTEIN:cation-transporting P-type ATPase
UPA3_0273
UPA3_0273
300748
301077
330
+
PROTEIN:hypothetical protein
UPA3_0274
UPA3_0274
301082
301708
627
+
PROTEIN:ATP/GTP-binding protein
UPA3_0275
valS
301689
304313
2625
+
PROTEIN:valyl-tRNA synthetase
UPA3_0276
UPA3_0276
304318
304836
519
+
PROTEIN:rRNA methylase
UPA3_0277
trmB
304842
305516
675
+
PROTEIN:tRNA (guanine-N(7)-)-methyltransferase
UPA3_0278
UPA3_0278
305553
305633
81
+
RNA:His tRNA
UPA3_0279
UPA3_0279
305764
306435
672
+
PROTEIN:hypothetical protein
UPA3_0280
UPA3_0280
306489
307856
1368
+
PROTEIN:hypothetical protein
UPA3_0281
UPA3_0281
307834
308292
459
+
PROTEIN:histidine triad protein HIT
UPA3_0283
UPA3_0283
308302
309057
756
+
PROTEIN:hypothetical protein
UPA3_0282
UPA3_0282
309054
310118
1065
-
PROTEIN:coproporphyrinogen III oxidase
UPA3_0284
UPA3_0284
310133
310345
213
-
PROTEIN:hypothetical protein
UPA3_0285
UPA3_0285
310525
311070
546
+
PROTEIN:hypothetical protein
UPA3_0286
UPA3_0286
311073
312164
1092
+
PROTEIN:nicotinate phosphoribosyltransferase
UPA3_0287
rpsU
312240
312407
168
+
PROTEIN:ribosomal protein S21
UPA3_0288
argS
312531
314183
1653
+
PROTEIN:arginyl-tRNA synthetase
UPA3_0289
pgk
314186
315454
1269
+
PROTEIN:phosphoglycerate kinase
UPA3_0290
UPA3_0290
315458
316549
1092
+
PROTEIN:endo-1,4-beta-glucanase
UPA3_0291
deoD
316623
317342
720
+
PROTEIN:purine nucleoside phosphorylase
UPA3_0292
UPA3_0292
317438
317830
393
+
PROTEIN:DNA-binding protein HU
UPA3_0293
UPA3_0293
317930
320086
2157
+
PROTEIN:ppGpp 3'-pyrophosphohydrolase
UPA3_0294
pyrG
320086
321699
1614
+
PROTEIN:CTP synthase
UPA3_0295
hisS
321703
322965
1263
+
PROTEIN:histidyl-tRNA synthetase
UPA3_0296
aspS
322971
324707
1737
+
PROTEIN:aspartyl-tRNA synthetase
UPA3_0297
UPA3_0297
324700
325536
837
+
PROTEIN:hypothetical protein
UPA3_0298
msrA
325577
326074
498
+
PROTEIN:methionine-S-sulfoxide reductase
UPA3_0299
UPA3_0299
326110
326700
591
-
PROTEIN:hypothetical protein
UPA3_0300
UPA3_0300
326707
327195
489
-
PROTEIN:glutathione peroxidase
UPA3_0301
UPA3_0301
327517
337683
10167
+
PROTEIN:hypothetical protein
UPA3_0302
UPA3_0302
337841
338680
840
+
PROTEIN:putative lipoprotein
UPA3_0303
UPA3_0303
338690
339400
711
+
PROTEIN:hypothetical protein
UPA3_0305
UPA3_0305
339400
340107
708
+
PROTEIN:hypothetical protein
UPA3_0304
UPA3_0304
340104
340616
513
-
PROTEIN:recombination protein U
UPA3_0306
efp
340759
341325
567
+
PROTEIN:translation elongation factor P
UPA3_0307
UPA3_0307
341328
341630
303
+
PROTEIN:hypothetical protein
UPA3_0308
nusB
341633
342016
384
+
PROTEIN:transcription antitermination factor NusB
UPA3_0309
UPA3_0309
342022
342726
705
+
PROTEIN:hypothetical protein
UPA3_0311
UPA3_0311
342753
343700
948
+
PROTEIN:hypothetical protein
UPA3_0310
UPA3_0310
343697
343864
168
-
PROTEIN:hypothetical protein
UPA3_0312
UPA3_0312
343952
345482
1531
+
RNA:small subunit ribosomal RNA
UPA3_0314
greA
348963
349433
471
+
PROTEIN:transcription elongation factor GreA
UPA3_0315
UPA3_0315
349512
349597
86
+
RNA:Tyr tRNA
UPA3_0316
UPA3_0316
349601
349677
77
+
RNA:Gln tRNA
UPA3_0317
UPA3_0317
349743
349819
77
+
RNA:Lys tRNA
UPA3_0318
UPA3_0318
349878
349965
88
+
RNA:Leu tRNA
UPA3_0319
UPA3_0319
349968
350041
74
+
RNA:Gly tRNA
UPA3_0320
UPA3_0320
350104
350871
768
+
PROTEIN:DNA methylase
UPA3_0321
UPA3_0321
350915
351835
921
+
PROTEIN:apurinic endonuclease (APN1)
UPA3_0322
UPA3_0322
352069
353019
951
-
PROTEIN:hypothetical protein
UPA3_0323
UPA3_0323
353022
354167
1146
-
PROTEIN:hypothetical protein
UPA3_0324
UPA3_0324
354504
355064
561
+
PROTEIN:hypothetical protein
UPA3_0325
rpsT
355132
355386
255
-
PROTEIN:ribosomal protein S20
UPA3_0326
UPA3_0326
355975
356415
441
-
PROTEIN:N-acetyltransferase complex, ribosomal pro
UPA3_0327
UPA3_0327
356393
356968
576
-
PROTEIN:glycoprotease family protein
UPA3_0328
UPA3_0328
356961
357839
879
-
PROTEIN:pseudouridylate synthase, 23S RNA-specific
UPA3_0329
UPA3_0329
357863
358654
792
-
PROTEIN:hypothetical protein
UPA3_0330
ppa
358654
359199
546
-
PROTEIN:inorganic diphosphatase
UPA3_0331
UPA3_0331
359365
359745
381
+
PROTEIN:hypothetical protein
UPA3_0332
UPA3_0332
360032
364681
4650
+
PROTEIN:efflux ABC transporter, permease protein
UPA3_0333
nusA
364794
366170
1377
+
PROTEIN:transcription termination factor NusA
UPA3_0334
UPA3_0334
366181
366432
252
+
PROTEIN:hypothetical protein
UPA3_0335
infB
366467
368311
1845
+
PROTEIN:translation initiation factor IF-2
UPA3_0336
rbfA
368319
368669
351
+
PROTEIN:ribosome-binding factor A
UPA3_0337
UPA3_0337
368677
369087
411
+
PROTEIN:hypothetical protein
UPA3_0338
UPA3_0338
369167
369862
696
-
PROTEIN:hypothetical protein
UPA3_0339
lepA
369875
371674
1800
-
PROTEIN:GTP-binding protein LepA
UPA3_0340
UPA3_0340
371792
372451
660
-
PROTEIN:LemA family protein
UPA3_0341
UPA3_0341
372597
372956
360
+
PROTEIN:hypothetical protein
UPA3_0342
UPA3_0342
372960
373733
774
+
PROTEIN:rRNA methylase
UPA3_0343
UPA3_0343
373717
374661
945
+
PROTEIN:DNA polymerase III delta subunit superfami
UPA3_0344
UPA3_0344
374818
376086
1269
+
PROTEIN:hypothetical protein
UPA3_0345
UPA3_0345
376087
377070
984
+
PROTEIN:hypothetical protein
UPA3_0346
UPA3_0346
377402
377524
123
+
PROTEIN:hypothetical protein
UPA3_0347
UPA3_0347
377799
378101
303
-
PROTEIN:hypothetical protein
UPA3_0348
udk
378130
378753
624
-
PROTEIN:uridine kinase
UPA3_0349
rpmF
378939
379112
174
+
PROTEIN:ribosomal protein L32
UPA3_0350
UPA3_0350
379121
379378
258
+
PROTEIN:hypothetical protein
UPA3_0351
UPA3_0351
379497
381506
2010
+
PROTEIN:hypothetical protein
UPA3_0352
UPA3_0352
381530
382837
1308
+
PROTEIN:hypothetical protein
UPA3_0353
UPA3_0353
382895
383704
810
+
PROTEIN:methylenetetrahydrofolate dehydrogenase
UPA3_0354
UPA3_0354
383781
385667
1887
+
PROTEIN:hypothetical protein
UPA3_0355
dnaK
385843
387654
1812
+
PROTEIN:chaperone protein DnaK
UPA3_0356
UPA3_0356
387766
388872
1107
+
PROTEIN:hypothetical protein
UPA3_0357
UPA3_0357
388909
389484
576
+
PROTEIN:hypothetical protein
UPA3_0358
cmk
389484
390158
675
+
PROTEIN:cytidylate kinase
UPA3_0359
UPA3_0359
390235
390522
288
+
PROTEIN:hypothetical protein
UPA3_0360
UPA3_0360
390574
391368
795
+
PROTEIN:1-acyl-sn-glycerol-3-phosphate acyltransfe
UPA3_0361
scpA
391509
392384
876
+
PROTEIN:segregation and condensation protein A
UPA3_0362
UPA3_0362
392377
393471
1095
+
PROTEIN:segregation and condensation protein B
UPA3_0363
tig
393566
394915
1350
+
PROTEIN:trigger factor
UPA3_0364
lon
395062
397437
2376
+
PROTEIN:ATP-dependent protease La
UPA3_0365
UPA3_0365
397523
398869
1347
+
PROTEIN:RNA polymerase sigma factor
UPA3_0366
UPA3_0366
398853
399518
666
+
PROTEIN:hypothetical protein
UPA3_0367
UPA3_0367
399499
400287
789
+
PROTEIN:NIF3 family protein
UPA3_0368
UPA3_0368
400317
400646
330
-
PROTEIN:hypothetical protein
UPA3_0369
UPA3_0369
400873
401898
1026
-
PROTEIN:hypothetical protein
UPA3_0370
truB
402004
402687
684
+
PROTEIN:tRNA pseudouridine synthase B
UPA3_0371
UPA3_0371
402653
403504
852
+
PROTEIN:riboflavin biosynthesis protein RibF-like
UPA3_0372
UPA3_0372
403647
405314
1668
+
PROTEIN:putative lipoprotein
UPA3_0373
UPA3_0373
405329
406399
1071
+
PROTEIN:citrate-dependent iron transport, membrane
UPA3_0374
UPA3_0374
406405
407508
1104
+
PROTEIN:ferrichrome ABC transporter
UPA3_0375
UPA3_0375
407657
409291
1635
+
PROTEIN:putative ABC substrate-binding protein - i
UPA3_0376
UPA3_0376
409384
411018
1635
+
PROTEIN:putative ABC substrate-binding protein - i
UPA3_0377
UPA3_0377
411176
411700
525
+
PROTEIN:putative lipoprotein
UPA3_0378
UPA3_0378
411742
413169
1428
-
PROTEIN:aldehyde dehydrogenase (NAD) family protei
UPA3_0379
asnA
413201
414190
990
-
PROTEIN:aspartate--ammonia ligase
UPA3_0380
pgsA
414168
414815
648
-
PROTEIN:CDP-diacylglycerol--glycerol-3-phosphate 3
UPA3_0381
asnS
414805
416169
1365
-
PROTEIN:asparaginyl-tRNA synthetase
UPA3_0382
UPA3_0382
416263
416886
624
-
PROTEIN:hypothetical protein
UPA3_0383
UPA3_0383
417026
418549
1524
-
PROTEIN:hypothetical protein
UPA3_0384
pdp
418791
420092
1302
+
PROTEIN:pyrimidine-nucleoside phosphorylase
UPA3_0385
alaS
420123
422843
2721
+
PROTEIN:alanyl-tRNA synthetase
UPA3_0386
UPA3_0386
422836
423279
444
+
PROTEIN:hypothetical protein
UPA3_0387
leuS
423295
425715
2421
+
PROTEIN:leucyl-tRNA synthetase
UPA3_0388
UPA3_0388
425909
426532
624
-
PROTEIN:integrase-recombinase protein
UPA3_0389
UPA3_0389
426926
427153
228
-
PROTEIN:hypothetical protein
UPA3_0390
UPA3_0390
427352
428545
1194
-
PROTEIN:multiple banded antigen
UPA3_0391
UPA3_0391
428856
429605
750
+
PROTEIN:hypothetical protein
UPA3_0392
UPA3_0392
429747
429959
213
-
PROTEIN:secreted protein
UPA3_0393
polC
430129
434457
4329
+
PROTEIN:DNA polymerase III, alpha subunit
UPA3_0394
UPA3_0394
434572
436212
1641
+
PROTEIN:putative lipoprotein
UPA3_0395
UPA3_0395
436292
437095
804
-
PROTEIN:hypothetical protein
UPA3_0396
UPA3_0396
437095
437601
507
-
PROTEIN:hypothetical protein
UPA3_0397
uvrC
437769
439523
1755
-
PROTEIN:excinuclease ABC, C subunit
UPA3_0398
UPA3_0398
439523
440497
975
-
PROTEIN:NAD+ dependent glycerol-3-phosphate dehydr
UPA3_0399
UPA3_0399
440505
441833
1329
-
PROTEIN:GTP-binding protein EngA
UPA3_0400
UPA3_0400
441969
443066
1098
+
PROTEIN:ComEC/Rec2 family protein
UPA3_0401
mraZ
443142
443579
438
+
PROTEIN:MraZ protein
UPA3_0402
mraW
443569
444495
927
+
PROTEIN:S-adenosyl-methyltransferase MraW
UPA3_0403
UPA3_0403
444514
445695
1182
+
PROTEIN:hypothetical protein
UPA3_0404
UPA3_0404
445791
446666
876
+
PROTEIN:hypothetical protein
UPA3_0405
UPA3_0405
446671
450525
3855
+
PROTEIN:hypothetical protein
UPA3_0406
UPA3_0406
450586
451401
816
+
PROTEIN:hypothetical protein
UPA3_0407
UPA3_0407
451508
453622
2115
+
PROTEIN:chaperone ClpB
UPA3_0408
UPA3_0408
453776
455560
1785
+
PROTEIN:hypothetical protein
UPA3_0409
acpS
455590
455937
348
-
PROTEIN:holo-(acyl-carrier-protein) synthase
UPA3_0410
UPA3_0410
455942
456241
300
-
PROTEIN:hypothetical protein
UPA3_0411
UPA3_0411
456292
456573
282
-
PROTEIN:hypothetical protein
UPA3_0412
UPA3_0412
456575
456853
279
-
PROTEIN:hypothetical protein
UPA3_0413
rnhC
456903
457853
951
-
PROTEIN:ribonuclease HIII
UPA3_0414
UPA3_0414
457953
458558
606
+
PROTEIN:hypothetical protein
UPA3_0415
UPA3_0415
458651
459697
1047
-
PROTEIN:hemin permease
UPA3_0416
UPA3_0416
459700
460719
1020
-
PROTEIN:ferrichrome ABC transporter
UPA3_0417
UPA3_0417
460730
462178
1449
-
PROTEIN:putative ABC substrate-binding protein - i
UPA3_0418
trmU
462259
463416
1158
-
PROTEIN:tRNA (5-methylaminomethyl-2-thiouridylate)
UPA3_0419
UPA3_0419
463525
464421
897
+
PROTEIN:hypothetical protein
UPA3_0420
UPA3_0420
464652
465458
807
-
PROTEIN:integrase-recombinase protein
UPA3_0421
UPA3_0421
465518
466291
774
-
PROTEIN:hypothetical protein
UPA3_0422
UPA3_0422
466506
467702
1197
+
PROTEIN:hypothetical protein
UPA3_0423
grpE
467795
468451
657
-
PROTEIN:co-chaperone GrpE
UPA3_0424
dnaJ
468451
469578
1128
-
PROTEIN:chaperone protein DnaJ
UPA3_0425
UPA3_0425
469706
470155
450
-
PROTEIN:hypothetical protein
UPA3_0426
UPA3_0426
470136
471056
921
-
PROTEIN:hypothetical protein
UPA3_0427
ileS
471208
473910
2703
+
PROTEIN:isoleucyl-tRNA synthetase
UPA3_0428
UPA3_0428
473914
474876
963
+
PROTEIN:O-sialoglycoprotein endopeptidase
UPA3_0429
metK
474876
476030
1155
+
PROTEIN:methionine adenosyltransferase
UPA3_0430
UPA3_0430
476087
476170
84
-
RNA:Leu tRNA
UPA3_0431
mutM
476233
477060
828
-
PROTEIN:formamidopyrimidine-DNA glycosylase
UPA3_0432
exo
477102
477971
870
-
PROTEIN:hypothetical protein
UPA3_0433
UPA3_0433
477975
480884
2910
-
PROTEIN:DNA polymerase III subunit alpha
UPA3_0434
UPA3_0434
480884
481096
213
-
PROTEIN:hypothetical protein
UPA3_0435
UPA3_0435
481181
482146
966
-
PROTEIN:DHH family protein
UPA3_0436
thiI
482164
483336
1173
-
PROTEIN:thiamine biosynthesis/tRNA modification pr
UPA3_0437
UPA3_0437
483314
484180
867
-
PROTEIN:hypothetical protein
UPA3_0438
UPA3_0438
484295
485041
747
+
PROTEIN:hypothetical protein
UPA3_0439
hrcA
485028
486101
1074
+
PROTEIN:heat-inducible transcription repressor Hrc
UPA3_0440
UPA3_0440
486091
486594
504
+
PROTEIN:hypothetical protein
UPA3_0441
UPA3_0441
486606
487316
711
+
PROTEIN:hypothetical protein
UPA3_0442
UPA3_0442
487309
488073
765
+
PROTEIN:hypothetical protein
UPA3_0443
UPA3_0443
488231
488428
198
-
PROTEIN:hypothetical protein
UPA3_0444
UPA3_0444
488679
489356
678
+
PROTEIN:hypothetical protein
UPA3_0445
UPA3_0445
489413
489964
552
+
PROTEIN:hypothetical protein
UPA3_0446
UPA3_0446
490176
490688
513
-
PROTEIN:urease
UPA3_0447
ureD
490795
491658
864
-
PROTEIN:urease accessory protein UreD
UPA3_0448
ureG
491668
492288
621
-
PROTEIN:urease accessory protein UreG
UPA3_0449
UPA3_0449
492370
493077
708
-
PROTEIN:urease accessory protein UreF
UPA3_0450
UPA3_0450
493064
493513
450
-
PROTEIN:urease accessory protein UreE
UPA3_0451
ureC
493578
495374
1797
-
PROTEIN:urease, alpha subunit
UPA3_0452
ureB
495420
495794
375
-
PROTEIN:urease, beta subunit
UPA3_0453
ureA
495841
496146
306
-
PROTEIN:urease, gamma subunit
UPA3_0454
UPA3_0454
496230
496358
129
-
PROTEIN:hypothetical protein
UPA3_0455
UPA3_0455
496448
497611
1164
+
PROTEIN:ferrichrome transport ATP-binding protein
UPA3_0456
rrmJ
497694
498437
744
+
PROTEIN:ribosomal RNA large subunit methyltransfer
UPA3_0457
UPA3_0457
498427
499509
1083
+
PROTEIN:DNA polymerase IV (Pol IV)
UPA3_0458
UPA3_0458
499521
499850
330
-
PROTEIN:holliday junction ATP-dependent DNA helica
UPA3_0459
UPA3_0459
499964
500215
252
+
PROTEIN:hypothetical protein
UPA3_0460
UPA3_0460
500297
501796
1500
-
PROTEIN:hypothetical protein
UPA3_0461
UPA3_0461
501744
503096
1353
-
PROTEIN:hypothetical protein
UPA3_0462
UPA3_0462
503050
504249
1200
-
PROTEIN:hypothetical protein
UPA3_0463
UPA3_0463
504640
506526
1887
-
PROTEIN:putative lipoprotein
UPA3_0464
UPA3_0464
506682
506858
177
-
PROTEIN:hypothetical protein
UPA3_0465
UPA3_0465
507050
507475
426
-
PROTEIN:hypothetical protein
UPA3_0466
UPA3_0466
508284
508658
375
+
PROTEIN:type I restriction enzyme S protein
UPA3_0467
ruvB
508734
509672
939
-
PROTEIN:holliday junction DNA helicase RuvB
UPA3_0468
UPA3_0468
509662
510249
588
-
PROTEIN:holliday junction ATP-dependent DNA helica
UPA3_0469
UPA3_0469
510291
511454
1164
-
PROTEIN:hypothetical protein
UPA3_0470
UPA3_0470
511534
512550
1017
-
PROTEIN:hypothetical protein
UPA3_0471
proS
512647
514065
1419
-
PROTEIN:prolyl-tRNA synthetase
UPA3_0472
UPA3_0472
514091
514558
468
-
PROTEIN:NifU family SUF system FeS assembly protei
UPA3_0473
UPA3_0473
514545
515753
1209
-
PROTEIN:aminotransferase NifS
UPA3_0474
UPA3_0474
515965
519351
3387
+
PROTEIN:hypothetical protein
UPA3_0475
UPA3_0475
519351
520010
660
+
PROTEIN:D-ribulose-5-phosphate 3 epimerase
UPA3_0476
pheT
520137
522455
2319
-
PROTEIN:phenylalanyl-tRNA synthetase, beta subunit
UPA3_0477
pheS
522487
523488
1002
-
PROTEIN:phenylalanyl-tRNA synthetase, alpha subuni
UPA3_0478
UPA3_0478
523495
523965
471
-
PROTEIN:hypothetical protein
UPA3_0479
nadE
523958
524725
768
-
PROTEIN:NAD+ synthetase
UPA3_0480
UPA3_0480
524733
526040
1308
-
PROTEIN:GTP-binding protein
UPA3_0481
UPA3_0481
526043
526861
819
-
PROTEIN:hypothetical protein
UPA3_0482
fmt
526928
527845
918
-
PROTEIN:methionyl-tRNA formyltransferase
UPA3_0483
UPA3_0483
527919
528644
726
-
PROTEIN:hypothetical protein
UPA3_0484
def
528894
529490
597
+
PROTEIN:peptide deformylase
UPA3_0485
parE
529497
531425
1929
+
PROTEIN:DNA topoisomerase IV, B subunit
UPA3_0486
parC
531431
533983
2553
+
PROTEIN:DNA topoisomerase IV, A subunit
UPA3_0487
UPA3_0487
533983
535068
1086
+
PROTEIN:hypothetical protein
UPA3_0488
UPA3_0488
535095
536273
1179
+
PROTEIN:nicotinate (nicotinamide) nucleotide adeny
UPA3_0489
mtnN
536283
536975
693
+
PROTEIN:MTA/SAH nucleosidase
UPA3_0490
UPA3_0490
537082
537333
252
+
PROTEIN:hypothetical protein
UPA3_0491
UPA3_0491
537623
539950
2328
+
PROTEIN:hypothetical protein
UPA3_0492
UPA3_0492
539997
543938
3942
+
PROTEIN:hypothetical protein
UPA3_0493
UPA3_0493
544025
545875
1851
-
PROTEIN:putative lipoprotein
UPA3_0494
UPA3_0494
546031
548508
2478
-
PROTEIN:res subunit family type III restriction en
UPA3_0495
UPA3_0495
548514
549596
1083
-
PROTEIN:DNA methylase
UPA3_0496
UPA3_0496
549751
550101
351
-
PROTEIN:type III restriction-modification system:
UPA3_0497
UPA3_0497
550255
553332
3078
-
PROTEIN:hypothetical protein
UPA3_0498
UPA3_0498
553643
555262
1620
+
PROTEIN:hypothetical protein
UPA3_0499
UPA3_0499
555594
558371
2778
-
PROTEIN:hypothetical protein
UPA3_0500
UPA3_0500
558651
572858
14208
-
PROTEIN:hypothetical protein
UPA3_0501
UPA3_0501
573085
576396
3312
-
PROTEIN:putative lipoprotein
UPA3_0502
ackA
576667
577830
1164
+
PROTEIN:acetate kinase
UPA3_0503
UPA3_0503
577834
579951
2118
-
PROTEIN:putative lipoprotein
UPA3_0504
UPA3_0504
580136
581440
1305
-
PROTEIN:hypothetical protein
UPA3_0505
UPA3_0505
581592
584333
2742
-
PROTEIN:putative lipoprotein
UPA3_0506
apt
584547
585068
522
-
PROTEIN:adenine phosphoribosyltransferase
UPA3_0507
UPA3_0507
585089
588100
3012
-
PROTEIN:putative lipoprotein
UPA3_0508
UPA3_0508
588422
588889
468
+
PROTEIN:hypothetical protein
UPA3_0509
era
588882
589784
903
+
PROTEIN:GTP-binding protein Era
UPA3_0510
recO
589784
590500
717
+
PROTEIN:DNA repair protein RecO
UPA3_0511
glyS
590534
591955
1422
+
PROTEIN:glycyl-tRNA synthetase
UPA3_0512
UPA3_0512
591943
593868
1926
+
PROTEIN:DNA primase
UPA3_0513
UPA3_0513
593947
611358
17412
-
PROTEIN:hypothetical protein
UPA3_0514
UPA3_0514
611586
612719
1134
+
PROTEIN:hypothetical protein
UPA3_0515
rpsD
612818
613426
609
-
PROTEIN:ribosomal protein S4
UPA3_0516
UPA3_0516
613692
615383
1692
+
PROTEIN:hypothetical protein
UPA3_0518
UPA3_0518
615430
615584
155
-
RNA:Phe tRNA
UPA3_0519
UPA3_0519
615585
615663
79
-
RNA:Met tRNA
UPA3_0520
UPA3_0520
615719
615813
95
-
RNA:Ser tRNA
UPA3_0521
UPA3_0521
615880
615959
80
-
RNA:Met tRNA
UPA3_0522
UPA3_0522
615960
616038
79
-
RNA:Met tRNA
UPA3_0523
UPA3_0523
616041
616119
79
-
RNA:Pro tRNA
UPA3_0524
UPA3_0524
616165
616243
79
-
RNA:Arg tRNA
UPA3_0525
UPA3_0525
616246
616320
75
-
RNA:Cys tRNA
UPA3_0526
UPA3_0526
616441
617232
792
-
PROTEIN:hypothetical protein
UPA3_0527
UPA3_0527
617236
619467
2232
-
PROTEIN:ATP-dependent DNA helicase PcrA
UPA3_0528
UPA3_0528
619492
620313
822
-
PROTEIN:RDD family protein
UPA3_0529
UPA3_0529
620314
621252
939
-
PROTEIN:glycosyltransferase
UPA3_0530
UPA3_0530
621338
621416
79
-
RNA:Arg tRNA
UPA3_0531
UPA3_0531
621491
621569
79
-
RNA:Arg tRNA
UPA3_0532
UPA3_0532
621666
621869
204
+
PROTEIN:hypothetical protein
UPA3_0533
UPA3_0533
621859
623001
1143
+
PROTEIN:hypothetical protein
UPA3_0534
UPA3_0534
623024
623833
810
+
PROTEIN:hypothetical protein
UPA3_0535
acpP
623850
624083
234
+
PROTEIN:acyl carrier protein
UPA3_0536
UPA3_0536
624146
624222
77
+
RNA:Sec tRNA
UPA3_0537
UPA3_0537
625189
626556
1368
-
PROTEIN:cytosol aminopeptidase family protein
UPA3_0538
UPA3_0538
626669
628972
2304
-
PROTEIN:cell division protein
UPA3_0539
UPA3_0539
628989
630659
1671
-
PROTEIN:hypothetical protein
UPA3_0540
UPA3_0540
630799
632775
1977
+
PROTEIN:ABC transporter
UPA3_0542
UPA3_0542
632780
633115
336
+
PROTEIN:hypothetical protein
UPA3_0541
cdsA
633104
634240
1137
-
PROTEIN:phosphatidate cytidylyltransferase
UPA3_0543
frr
634251
634802
552
-
PROTEIN:ribosome recycling factor
UPA3_0544
pyrH
634820
635527
708
-
PROTEIN:uridylate kinase
UPA3_0545
tsf
635611
636486
876
-
PROTEIN:translation elongation factor Ts
UPA3_0546
UPA3_0546
636634
636717
84
-
RNA:Leu tRNA
UPA3_0547
UPA3_0547
636721
636798
78
-
RNA:Lys tRNA
UPA3_0549
UPA3_0549
636868
637022
155
-
RNA:Thr tRNA
UPA3_0550
UPA3_0550
637067
637221
155
-
RNA:Glu tRNA
UPA3_0552
UPA3_0552
637414
638469
1056
+
PROTEIN:ferrichrome ABC transporter
UPA3_0553
UPA3_0553
638471
639496
1026
+
PROTEIN:ferric anguibactin transport system permer
UPA3_0554
UPA3_0554
639536
641146
1611
+
PROTEIN:putative ABC substrate-binding protein - i
UPA3_0555
UPA3_0555
641218
641436
219
+
PROTEIN:hypothetical protein
UPA3_0556
UPA3_0556
641550
643343
1794
-
PROTEIN:hypothetical protein
UPA3_0557
UPA3_0557
643432
645234
1803
-
PROTEIN:hypothetical protein
UPA3_0558
pepF2
645297
647132
1836
-
PROTEIN:oligoendopeptidase F
UPA3_0559
tuf
647227
648411
1185
-
PROTEIN:translation elongation factor Tu
UPA3_0560
fusA
648548
650614
2067
-
PROTEIN:translation elongation factor G
UPA3_0561
rpsG
650641
651108
468
-
PROTEIN:ribosomal protein S7
UPA3_0562
rpsL
651136
651561
426
-
PROTEIN:ribosomal protein S12
UPA3_0563
UPA3_0563
651747
653258
1512
-
PROTEIN:5'-nucleotidase
UPA3_0564
UPA3_0564
653469
656384
2916
-
PROTEIN:hypothetical protein
UPA3_0565
UPA3_0565
656388
657287
900
-
PROTEIN:cytosine-specific methyltransferase
UPA3_0566
UPA3_0566
657850
658605
756
+
PROTEIN:integrase-recombinase protein
UPA3_0567
UPA3_0567
658735
660393
1659
-
PROTEIN:phosphomannomutase
UPA3_0568
cdd
660428
660823
396
-
PROTEIN:cytidine deaminase
UPA3_0569
UPA3_0569
660948
661023
76
-
RNA:Trp tRNA
UPA3_0570
UPA3_0570
661034
662107
1074
-
PROTEIN:creatinase/peptidase, M24 family protein
UPA3_0571
rpmG
662118
662279
162
-
PROTEIN:ribosomal protein L33
UPA3_0572
thrS
662340
664082
1743
-
PROTEIN:threonyl-tRNA synthetase
UPA3_0574
UPA3_0574
664235
665131
897
+
PROTEIN:hypothetical protein
UPA3_0573
truA
665128
665853
726
-
PROTEIN:tRNA pseudouridine synthase A
UPA3_0575
UPA3_0575
665915
667231
1317
-
PROTEIN:cobalt transport protein
UPA3_0576
UPA3_0576
667232
668533
1302
-
PROTEIN:cobalt import ATP-binding protein CbiO 1
UPA3_0577
UPA3_0577
668521
669405
885
-
PROTEIN:cobalt import ATP-binding protein CbiO 2
UPA3_0578
rplA
669545
670234
690
-
PROTEIN:ribosomal protein L1
UPA3_0579
rplK
670237
670689
453
-
PROTEIN:ribosomal protein L11
UPA3_0580
UPA3_0580
670968
677759
6792
+
PROTEIN:efflux ABC transporter, permease protein
UPA3_0581
UPA3_0581
677808
679241
1434
-
PROTEIN:glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amid
UPA3_0582
UPA3_0582
679244
680677
1434
-
PROTEIN:glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amid
UPA3_0583
UPA3_0583
680667
680951
285
-
PROTEIN:hypothetical protein
UPA3_0584
UPA3_0584
680972
682000
1029
-
PROTEIN:aspartyl/glutamyl-tRNA amidotransferase su
UPA3_0585
ung
682027
682665
639
-
PROTEIN:uracil-DNA glycosylase
UPA3_0586
UPA3_0586
682644
684410
1767
-
PROTEIN:putative lipoprotein
UPA3_0587
UPA3_0587
684413
685873
1461
-
PROTEIN:replicative DNA helicase
UPA3_0588
rplI
685879
686316
438
-
PROTEIN:ribosomal protein L9
UPA3_0589
rpsR
686400
686639
240
-
PROTEIN:ribosomal protein S18
UPA3_0590
ssb
686648
687148
501
-
PROTEIN:single-strand binding protein
UPA3_0591
UPA3_0591
687193
687675
483
-
PROTEIN:30S ribosomal protein S6
UPA3_0592
UPA3_0592
687844
688353
510
+
PROTEIN:acetyltransferase
UPA3_0647
UPA3_0647
688458
688870
413
-
RNA:tmRNA
UPA3_0594
UPA3_0594
689199
689687
489
-
PROTEIN:hypothetical protein
UPA3_0595
UPA3_0595
689696
693091
3396
-
PROTEIN:solute-binding family 5 protein
UPA3_0596
UPA3_0596
693110
698761
5652
-
PROTEIN:hypothetical protein
UPA3_0597
UPA3_0597
698780
700099
1320
-
PROTEIN:oligopeptide transport system permease pro
UPA3_0598
UPA3_0598
700120
701640
1521
-
PROTEIN:oligopeptide transport system permease pro
UPA3_0599
UPA3_0599
701644
702642
999
-
PROTEIN:oligopeptide transport system permease pro
UPA3_0600
UPA3_0600
702647
703780
1134
-
PROTEIN:oligopeptide transport system permease pro
UPA3_0601
UPA3_0601
703795
703965
171
-
PROTEIN:hypothetical protein
UPA3_0602
UPA3_0602
704270
705463
1194
-
PROTEIN:putative lipoprotein
UPA3_0603
UPA3_0603
705526
705705
180
-
PROTEIN:hypothetical protein
UPA3_0604
UPA3_0604
705893
707377
1485
-
PROTEIN:hypothetical protein
UPA3_0605
rplS
707512
707883
372
-
PROTEIN:ribosomal protein L19
UPA3_0606
trmD
707893
708579
687
-
PROTEIN:tRNA (guanine-N1)-methyltransferase
UPA3_0607
rpsP
708592
708888
297
-
PROTEIN:ribosomal protein S16
UPA3_0608
UPA3_0608
708984
709817
834
-
PROTEIN:hypothetical protein
UPA3_0609
UPA3_0609
709848
711638
1791
-
PROTEIN:metallo-beta-lactamase superfamily protein
UPA3_0610
UPA3_0610
711878
715981
4104
-
PROTEIN:viral phosphatase
UPA3_0611
UPA3_0611
716177
717913
1737
+
PROTEIN:hypothetical protein
UPA3_0612
UPA3_0612
717978
719264
1287
+
PROTEIN:potassium channel protein
UPA3_0613
UPA3_0613
719302
720219
918
-
PROTEIN:hypothetical protein
UPA3_0614
UPA3_0614
720225
721178
954
-
PROTEIN:hypothetical protein
UPA3_0615
rpsI
721248
721649
402
-
PROTEIN:ribosomal protein S9
UPA3_0616
rplM
721669
722115
447
-
PROTEIN:ribosomal protein L13
UPA3_0617
UPA3_0617
722429
724009
1581
+
PROTEIN:putative lipoprotein
UPA3_0618
UPA3_0618
724204
725817
1614
+
PROTEIN:amino acid transporter protein
UPA3_0619
UPA3_0619
726014
726514
501
+
PROTEIN:preprotein translocase SecE subunit
UPA3_0620
UPA3_0620
726540
727316
777
+
PROTEIN:transcription termination/antitermination
UPA3_0621
UPA3_0621
727803
729134
1332
-
PROTEIN:ATP-dependent RNA helicase
UPA3_0622
UPA3_0622
729135
730739
1605
-
PROTEIN:MATE transporter family DNA damage inducib
UPA3_0623
UPA3_0623
731213
732775
1563
-
PROTEIN:MATE transporter family DNA damage inducib
UPA3_0624
deoC
732924
733571
648
-
PROTEIN:deoxyribose-phosphate aldolase
UPA3_0625
tkt
733583
735544
1962
-
PROTEIN:transketolase
UPA3_0626
UPA3_0626
735574
735837
264
-
PROTEIN:phosphohistidinoprotein-hexose phosphotran
UPA3_0627
UPA3_0627
735937
737535
1599
-
PROTEIN:cardiolipin synthase
UPA3_0628
UPA3_0628
737613
737703
91
-
RNA:Ser tRNA
UPA3_0629
UPA3_0629
737792
738112
321
-
PROTEIN:thioredoxin
UPA3_0630
topA
738141
740186
2046
-
PROTEIN:DNA topoisomerase I
UPA3_0631
UPA3_0631
740249
740959
711
-
PROTEIN:hypothetical protein
UPA3_0632
UPA3_0632
741010
741831
822
-
PROTEIN:GTPase
UPA3_0633
UPA3_0633
741843
742283
441
-
PROTEIN:hypothetical protein
UPA3_0634
tdk
742320
742991
672
-
PROTEIN:thymidine kinase
UPA3_0635
ychF
742998
744104
1107
-
PROTEIN:GTP-binding protein YchF
UPA3_0636
fba
744115
744987
873
-
PROTEIN:fructose-1,6-bisphosphate aldolase, class
UPA3_0637
rpoE
744992
745474
483
-
PROTEIN:DNA-directed RNA polymerase, delta subunit
UPA3_0638
UPA3_0638
745522
746739
1218
-
PROTEIN:HD domain-containing protein
UPA3_0639
gltX
746748
748196
1449
-
PROTEIN:glutamyl-tRNA synthetase
UPA3_0640
UPA3_0640
748186
748983
798
-
PROTEIN:GHMP kinase ATP-binding subunit
UPA3_0641
ksgA
749017
749850
834
-
PROTEIN:dimethyladenosine transferase
UPA3_0642
UPA3_0642
749852
751003
1152
-
PROTEIN:membrane protein OxaA
UPA3_0643
rnpA
751042
751383
342
-
PROTEIN:ribonuclease P protein component
UPA3_0644
rpmH
751389
751535
147
-
PROTEIN:ribosomal protein L34




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Last modified: 4/05/2010.