The Microbial Promoter Database
| NCBI ID : NC_008513 Version : NC_008513.1 Clade: Bacteria-Gammaproteobacteria Create Date: 24/10/06 Update Date: 22/10/10 | Genome size: 416380 nts %GC content: 20.1 %Coding (including protein and RNA): 86.85 No. of protein coding genes: 357 No. of RNA coding genes: 37 | No of Adenine(A) Bases : 166899 No of Guanine(G) Bases : 41989 No of Thymine(T) Bases : 165801 No of Cytosine(C) Bases : 41691 |
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| Gene ID | Gene name | Left end position |
Right end position |
Length | Transcription direction |
Gene Product |
|---|---|---|---|---|---|---|
| PROTEIN:tRNA uridine 5-carboxymethylaminomethyl mo | ||||||
| PROTEIN:DNA gyrase subunit B | ||||||
| PROTEIN:DNA polymerase III, b subunit | ||||||
| PROTEIN:DnaA | ||||||
| PROTEIN:50S ribosomal protein L34 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:GTP-binding protein | ||||||
| RNA:Phe tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:chaperonin GroEL | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:DNA replication protein DnaC | ||||||
| PROTEIN:YhhF | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:RNA polymerase sigma-32 factor | ||||||
| PROTEIN:5-methyltetrahydropteroyltriglutamate--hom | ||||||
| PROTEIN:RNA polymerase, b' subunit | ||||||
| PROTEIN:RNA polymerase, b subunit | ||||||
| PROTEIN:50S ribosomal protein L12 | ||||||
| PROTEIN:50S ribosomal protein L10 | ||||||
| PROTEIN:50S ribosomal protein L1 | ||||||
| PROTEIN:50S ribosomal protein L11 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:Thr tRNA | ||||||
| RNA:Gly tRNA | ||||||
| RNA:Tyr tRNA | ||||||
| RNA:Thr tRNA | ||||||
| PROTEIN:5,10-methylenetetrahydrofolate reductase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:RNA polymerase major s factor | ||||||
| PROTEIN:DNA primase | ||||||
| PROTEIN:30S ribosomal protein S21 | ||||||
| PROTEIN:Gcp | ||||||
| PROTEIN:tRNA CCA-pyrophosphorylase | ||||||
| PROTEIN:DNA ligase | ||||||
| RNA:Lys tRNA | ||||||
| RNA:Val tRNA | ||||||
| PROTEIN:GltX | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:flagellar biosynthesis protein FliP | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:50S ribosomal protein L33 | ||||||
| PROTEIN:50S ribosomal protein L28 | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:RNase P, RNA component | ||||||
| PROTEIN:YraL | ||||||
| PROTEIN:3-oxoacyl-(acyl-carrier-protein) synthase | ||||||
| PROTEIN:transaldolase B | ||||||
| PROTEIN:TktB | ||||||
| PROTEIN:succinyl-diaminopimelate desuccinylase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:chorismate synthase | ||||||
| PROTEIN:YfcN | ||||||
| PROTEIN:ATP phosphoribosyltransferase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:imidazole glycerol-phosphate dehydratase/h | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:imidazole glycerol phosphate synthase subu | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:6-phosphogluconate dehydrogenase, decarbox | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:Val tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:FeS assembly scaffold protein | ||||||
| PROTEIN:phospho-2-dehydro-3-deoxyheptonate aldolas | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:50S ribosomal protein L35 | ||||||
| PROTEIN:50S ribosomal protein L20 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:glycyl-tRNA synthetase subunit alpha | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:50S ribosomal protein L25 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:30S ribosomal protein S20 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:NADH dehydrogenase I chain A | ||||||
| PROTEIN:NADH dehydrogenase subunit B | ||||||
| PROTEIN:bifunctional NADH:ubiquinone oxidoreductas | ||||||
| PROTEIN:NADH dehydrogenase I chain E | ||||||
| PROTEIN:NADH dehydrogenase I chain F | ||||||
| PROTEIN:NADH dehydrogenase I chain G | ||||||
| PROTEIN:NADH dehydrogenase I chain H | ||||||
| PROTEIN:NADH dehydrogenase I chain I | ||||||
| PROTEIN:NADH dehydrogenase I chain J | ||||||
| PROTEIN:NADH dehydrogenase I chain K | ||||||
| PROTEIN:NADH dehydrogenase I chain L | ||||||
| PROTEIN:NADH dehydrogenase I chain M | ||||||
| PROTEIN:NADH dehydrogenase I chain N | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:YchA | ||||||
| PROTEIN:AckA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:DNA gyrase, A subunit | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:Ung | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:tmRNA | ||||||
| PROTEIN:YdhD | ||||||
| PROTEIN:ribonuclease T | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:GTP-binding protein | ||||||
| PROTEIN:threonine synthase | ||||||
| PROTEIN:homoserine kinase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:pyruvate dehydrogenase subunit E1 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:LpdA | ||||||
| PROTEIN:YadR | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:ATP-binding cell division protein | ||||||
| PROTEIN:S-adenosyl-dependent methyl transferase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:IlvI | ||||||
| PROTEIN:2,3,4,5-tetrahydropyridine-2-carboxylate N | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:30S ribosomal protein S2 | ||||||
| PROTEIN:Tsf | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:YaeT | ||||||
| PROTEIN:(3R)-hydroxymyristoyl-(acyl carrier protei | ||||||
| PROTEIN:DNA polymerase III, a subunit | ||||||
| PROTEIN:prolyl-tRNA synthetase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:FlhA | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:16S ribosomal RNA | ||||||
| RNA:Ile tRNA | ||||||
| RNA:Ala tRNA | ||||||
| PROTEIN:DNA polymerase III, e subunit | ||||||
| RNA:Asp tRNA | ||||||
| PROTEIN:GrpE1 | ||||||
| PROTEIN:SsrA-binding protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:GTP-binding protein LepA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:FabI | ||||||
| PROTEIN:exoribonuclease II | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:lipoyl synthase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:YciA | ||||||
| PROTEIN:YciC | ||||||
| PROTEIN:YciL | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:YfgB | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:6-phosphogluconolactonase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:YbgI | ||||||
| PROTEIN:2-oxoglutarate dehydrogenase E1 component | ||||||
| PROTEIN:2-oxoglutarate dehydrogenase E2 component | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:6-phosphofructokinase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:HimD | ||||||
| PROTEIN:30S ribosomal protein S1 | ||||||
| PROTEIN:3-phosphoshikimate 1-carboxyvinyltransfera | ||||||
| PROTEIN:phosphoserine aminotransferase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:AspS | ||||||
| PROTEIN:YebC | ||||||
| PROTEIN:PykA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:YoaE | ||||||
| PROTEIN:YeaZ | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:16S RNA m2G1207 methylase | ||||||
| RNA:Leu tRNA | ||||||
| RNA:Cys tRNA | ||||||
| RNA:Ser tRNA | ||||||
| PROTEIN:OmpA | ||||||
| PROTEIN:FlgF | ||||||
| PROTEIN:FlgH | ||||||
| PROTEIN:FlgI | ||||||
| PROTEIN:RluC | ||||||
| PROTEIN:50S ribosomal protein L32 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:3-oxoacyl-(acyl-carrier protein) reductase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:DNA polymerase III, d' subunit | ||||||
| PROTEIN:YcfH | ||||||
| PROTEIN:asparaginyl-tRNA synthetase | ||||||
| PROTEIN:YceA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:YhaR | ||||||
| PROTEIN:ATP-dependent RNA helicase | ||||||
| PROTEIN:polynucleotide phosphorylase/polyadenylase | ||||||
| PROTEIN:30S ribosomal protein S15 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:NusA | ||||||
| RNA:Leu tRNA | ||||||
| PROTEIN:SecG | ||||||
| PROTEIN:ATP-dependent protease | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:YrbA | ||||||
| PROTEIN:50S ribosomal protein L21 | ||||||
| PROTEIN:50S ribosomal protein L27 | ||||||
| PROTEIN:Obg family GTP-binding protein | ||||||
| PROTEIN:30S ribosomal protein S9 | ||||||
| PROTEIN:50S ribosomal protein L13 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:30S ribosomal protein S16 | ||||||
| PROTEIN:16s rRNA processing protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:50S ribosomal protein L19 | ||||||
| PROTEIN:3-dehydroquinate dehydratase | ||||||
| PROTEIN:DNA-bending protein | ||||||
| PROTEIN:RluD | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:Ser tRNA | ||||||
| RNA:Arg tRNA | ||||||
| PROTEIN:ZapA | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:Gln tRNA | ||||||
| RNA:Leu tRNA | ||||||
| RNA:Met tRNA | ||||||
| PROTEIN:glutaminyl-tRNA synthetase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:5'-3' exonuclease domain-containing protei | ||||||
| PROTEIN:EngB | ||||||
| PROTEIN:GTP-binding elongation factor family prote | ||||||
| PROTEIN:YgfZ | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:diaminopimelate decarboxylase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:YbeY | ||||||
| PROTEIN:LeuS | ||||||
| PROTEIN:DNA polymerase III, d subunit | ||||||
| PROTEIN:YhhP | ||||||
| PROTEIN:aspartate-semialdehyde dehydrogenase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:fructose-bisphosphate aldolase | ||||||
| PROTEIN:YggB | ||||||
| PROTEIN:RecC | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:Met tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:CyoE | ||||||
| PROTEIN:CyoD | ||||||
| PROTEIN:CyoC | ||||||
| PROTEIN:CyoB | ||||||
| PROTEIN:CyoA | ||||||
| PROTEIN:BolA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:ATP-dependent protease ATP-binding subunit | ||||||
| PROTEIN:DNA-binding ATP-dependent protease La | ||||||
| PROTEIN:ABC transporter ATP-binding protein | ||||||
| PROTEIN:ABC transporter ATP-binding protein | ||||||
| RNA:Ffs | ||||||
| PROTEIN:DNA polymerase III, g and t subunits | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:heat shock protein 90 | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:Arg tRNA | ||||||
| PROTEIN:5,10-methylene-tetrahydrofolate dehydrogen | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:cold shock protein CspE | ||||||
| RNA:5S ribosomal RNA | ||||||
| RNA:23S ribosomal RNA | ||||||
| RNA:Glu tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:50S ribosomal protein L17 | ||||||
| PROTEIN:DNA-directed RNA polymerase subunit alpha | ||||||
| PROTEIN:30S ribosomal protein S4 | ||||||
| PROTEIN:30S ribosomal protein S11 | ||||||
| PROTEIN:30S ribosomal protein S13 | ||||||
| PROTEIN:50S ribosomal protein L36 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:50S ribosomal protein L15 | ||||||
| PROTEIN:50S ribosomal subunit protein L30 | ||||||
| PROTEIN:30S ribosomal protein S5 | ||||||
| PROTEIN:50S ribosomal protein L18 | ||||||
| PROTEIN:50S ribosomal protein L6 | ||||||
| PROTEIN:30S ribosomal protein S8 | ||||||
| PROTEIN:30S ribosomal protein S14 | ||||||
| PROTEIN:50S ribosomal protein L5 | ||||||
| PROTEIN:50S ribosomal protein L24 | ||||||
| PROTEIN:50S ribosomal protein L14 | ||||||
| PROTEIN:30S ribosomal protein S17 | ||||||
| PROTEIN:50S ribosomal protein L29 | ||||||
| PROTEIN:50S ribosomal protein L16 | ||||||
| PROTEIN:30S ribosomal protein S3 | ||||||
| PROTEIN:50S ribosomal protein L22 | ||||||
| PROTEIN:30S ribosomal protein S19 | ||||||
| PROTEIN:50S ribosomal protein L2 | ||||||
| PROTEIN:50S ribosomal protein L23 | ||||||
| PROTEIN:50S ribosomal protein L4 | ||||||
| PROTEIN:50S ribosomal protein L3 | ||||||
| PROTEIN:30S ribosomal protein S10 | ||||||
| PROTEIN:elongation factor Tu | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:30S ribosomal protein S7 | ||||||
| PROTEIN:30S ribosomal protein S12 | ||||||
| PROTEIN:YheL | ||||||
| PROTEIN:YheM | ||||||
| PROTEIN:YheN | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:3-dehydroquinate synthase | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:Ser tRNA | ||||||
| PROTEIN:GNT I transport systemmembrane-bound prote | ||||||
| PROTEIN:BioH | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:tRNA-dihydrouridine synthase A | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:YggF | ||||||
| PROTEIN:YggW | ||||||
| PROTEIN:A/G-specific adenine glycosylase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:SbcB | ||||||
| RNA:Asn tRNA | ||||||
| RNA:Ile tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:50S ribosomal protein L9 | ||||||
| PROTEIN:30S ribosomal protein S18 | ||||||
| PROTEIN:30S ribosomal protein S6 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:Pgi | ||||||
| PROTEIN:oligoribonuclease | ||||||
| RNA:Gly tRNA | ||||||
| PROTEIN:50S ribosomal protein L31 | ||||||
| PROTEIN:ATP-dependent protease peptidase subunit | ||||||
| PROTEIN:ATP-dependent protease ATP-binding subunit | ||||||
| PROTEIN:Fpr | ||||||
| PROTEIN:Yba3 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:CyaA | ||||||
| RNA:Pro tRNA | ||||||
| RNA:His tRNA | ||||||
| RNA:Arg tRNA | ||||||
| PROTEIN:transcription termination factor Rho | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:ATP-dependent DNA helicase | ||||||
| PROTEIN:ketol-acid reductoisomerase | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:Trp tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:scaffold protein | ||||||
| PROTEIN:HscB | ||||||
| PROTEIN:HscA | ||||||
| PROTEIN:Fdx | ||||||
| PROTEIN:EngA | ||||||
| PROTEIN:YfgM |
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Last modified: 15/06/2012.