The Microbial Promoter Database
| NCBI ID : NC_014004 Version : NC_014004.1 Clade: Bacteria-Bacteroidetes Create Date: 07/04/10 Update Date: 30/11/10 | Genome size: 243933 nts %GC content: 22.49 %Coding (including protein and RNA): 97.05 No. of protein coding genes: 226 No. of RNA coding genes: 35 | No of Adenine(A) Bases : 94523 No of Guanine(G) Bases : 27872 No of Thymine(T) Bases : 94542 No of Cytosine(C) Bases : 26996 |
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| Gene ID | Gene name | Left end position |
Right end position |
Length | Transcription direction |
Gene Product |
|---|---|---|---|---|---|---|
| PROTEIN:lipoate-protein ligase B | ||||||
| PROTEIN:valyl-tRNA synthetase | ||||||
| PROTEIN:ATP-dependent metalloprotease FtsH | ||||||
| PROTEIN:DNA polymerase III subunit beta | ||||||
| PROTEIN:phenylalanyl-tRNA synthetase subunit beta | ||||||
| PROTEIN:3-dehydroquinate synthetase | ||||||
| PROTEIN:DNA gyrase, A subunit | ||||||
| PROTEIN:30S ribosomal protein S1 | ||||||
| PROTEIN:NADH dehydrogenase, FAD-containing subunit | ||||||
| PROTEIN:transcription termination factor | ||||||
| PROTEIN:bacterial peptide chain release factor 1 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:3-dehydroquinate dehydratase | ||||||
| PROTEIN:3-oxoacyl-(acyl-carrier-protein) synthase | ||||||
| PROTEIN:acyl carrier protein | ||||||
| PROTEIN:ATP synthase subunit delta/epsilon | ||||||
| PROTEIN:F1 ATP synthase subunit beta | ||||||
| PROTEIN:dimethyladenosine transferase | ||||||
| RNA:Met tRNA | ||||||
| PROTEIN:signal peptidase II | ||||||
| RNA:Asn tRNA | ||||||
| PROTEIN:glutaminyl-tRNA synthetase | ||||||
| PROTEIN:glucose-inhibited division protein A | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:Cys tRNA | ||||||
| PROTEIN:ribose-phosphate pyrophosphokinase | ||||||
| PROTEIN:50S ribosomal protein L25 | ||||||
| PROTEIN:prolipoprotein diacylglyceryltransferase | ||||||
| PROTEIN:F0F1-type ATP synthase subunit gamma | ||||||
| PROTEIN:proton translocating ATP synthase, F1 subu | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:F0 ATP synthase subunit b | ||||||
| PROTEIN:ATP synthase F0 subcomplex C subunit | ||||||
| PROTEIN:F0F1-type ATP synthase subunit a | ||||||
| PROTEIN:aspartate kinase | ||||||
| PROTEIN:multiple antibiotic transporter | ||||||
| PROTEIN:3-isopropylmalate dehydrogenase | ||||||
| PROTEIN:3-isopropylmalate dehydratase small subuni | ||||||
| PROTEIN:3-isopropylmalate dehydratase large subuni | ||||||
| PROTEIN:isopropylmalate/homocitrate/citramalate sy | ||||||
| PROTEIN:tyrosyl-tRNA synthetase | ||||||
| PROTEIN:leucyl-tRNA synthetase | ||||||
| RNA:Phe tRNA | ||||||
| PROTEIN:pyruvate:ferredoxin oxidoreductase-like 2- | ||||||
| PROTEIN:seryl-tRNA synthetase | ||||||
| PROTEIN:50S ribosomal protein L28P | ||||||
| PROTEIN:50S ribosomal protein L33P | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:His tRNA | ||||||
| PROTEIN:pseudouridine synthase, RluA family | ||||||
| PROTEIN:pseudouridylate synthase I | ||||||
| PROTEIN:DNA-directed RNA polymerase subunit beta' | ||||||
| PROTEIN:DNA-directed RNA polymerase subunit beta | ||||||
| PROTEIN:50S ribosomal protein L10/50S ribosomal pr | ||||||
| PROTEIN:50S ribosomal protein L1P | ||||||
| PROTEIN:50S ribosomal protein L11P | ||||||
| RNA:Trp tRNA | ||||||
| PROTEIN:translation elongation factor EF-1A/EF-Tu | ||||||
| RNA:Thr tRNA | ||||||
| RNA:Gly tRNA | ||||||
| RNA:Tyr tRNA | ||||||
| RNA:Thr tRNA | ||||||
| PROTEIN:cytochrome c | ||||||
| PROTEIN:Fe-S-cluster-containing hydrogenase compon | ||||||
| PROTEIN:quinol:cytochrome c oxidoreductase quinone | ||||||
| PROTEIN:quinol:cytochrome c oxidoreductase membran | ||||||
| PROTEIN:quinol:cytochrome c oxidoreductase monohem | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:SufE protein | ||||||
| PROTEIN:geranylgeranyl pyrophosphate synthase | ||||||
| RNA:16S ribosomal RNA | ||||||
| RNA:Ile tRNA | ||||||
| RNA:Ala tRNA | ||||||
| RNA:23S ribosomal RNA | ||||||
| RNA:5S ribosomal RNA | ||||||
| PROTEIN:succinyl-CoA synthetase subunit beta | ||||||
| PROTEIN:twin arginine-targeting protein translocas | ||||||
| PROTEIN:protease subunit of ATp-dependent Clp prot | ||||||
| PROTEIN:ATP-dependent Clp protease ATP-binding sub | ||||||
| PROTEIN:DNA mismatch repair protein MutS | ||||||
| RNA:Gly tRNA | ||||||
| RNA:Leu tRNA | ||||||
| PROTEIN:30S ribosomal protein S2P | ||||||
| PROTEIN:30S ribosomal protein S9P | ||||||
| PROTEIN:ribosomal protein L13 | ||||||
| PROTEIN:chaperone protein DnaK | ||||||
| PROTEIN:bacterial translation initiation factor 3 | ||||||
| PROTEIN:50S ribosomal protein L35P | ||||||
| PROTEIN:50S ribosomal protein L20P | ||||||
| PROTEIN:peptide deformylase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:tetrahydrodipicolinate N-succinyltransfera | ||||||
| PROTEIN:branched-chain amino acid aminotransferase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:tRNA (5-methylaminomethyl-2-thiouridylate) | ||||||
| PROTEIN:DnaJ-class molecular chaperone | ||||||
| PROTEIN:molecular chaperone GrpE | ||||||
| PROTEIN:dihydrolipoamide dehydrogenase | ||||||
| PROTEIN:cellulase M-like protein | ||||||
| PROTEIN:ribosome-binding factor A | ||||||
| PROTEIN:tRNA modification GTPase TrmE | ||||||
| RNA:Val tRNA | ||||||
| PROTEIN:DNA-directed DNA polymerase III (polc) | ||||||
| PROTEIN:argininosuccinate synthase | ||||||
| PROTEIN:N-acetyl-gamma-glutamyl-phosphate reductas | ||||||
| PROTEIN:ornithine/acetylornithine aminotransferase | ||||||
| PROTEIN:carbamoyl-phosphate synthase small subunit | ||||||
| PROTEIN:carbamoyl-phosphate synthase large subunit | ||||||
| PROTEIN:ornithine carbamoyltransferase | ||||||
| PROTEIN:acetylglutamate kinase | ||||||
| PROTEIN:acetylornithine deacetylase/succinyl-diami | ||||||
| RNA:Asp tRNA | ||||||
| RNA:Lys tRNA | ||||||
| PROTEIN:shikimate kinase | ||||||
| PROTEIN:tRNA(Ile)-lysidine synthetase | ||||||
| PROTEIN:tryptophan synthase subunit alpha | ||||||
| PROTEIN:tryptophan synthase subunit beta | ||||||
| PROTEIN:indole-3-glycerol phosphate synthase | ||||||
| PROTEIN:anthranilate phosphoribosyltransferase | ||||||
| PROTEIN:anthranilate synthase, component II | ||||||
| PROTEIN:anthranilate/para-aminobenzoate synthase c | ||||||
| PROTEIN:cysteine sulfinate desulfinase/cysteine de | ||||||
| PROTEIN:prolyl-tRNA synthetase | ||||||
| PROTEIN:ATP-dependent protease La | ||||||
| PROTEIN:diaminopimelate decarboxylase | ||||||
| RNA:Ser tRNA | ||||||
| PROTEIN:chorismate synthase | ||||||
| PROTEIN:HSP90 family molecular chaperone | ||||||
| PROTEIN:MiaB family RNA modification protein | ||||||
| PROTEIN:protein translocase subunit secA | ||||||
| PROTEIN:50S ribosomal protein L19P | ||||||
| PROTEIN:4Fe-4S binding domain protein | ||||||
| PROTEIN:1,4-dihydroxy-2-naphthoate octaprenyltrans | ||||||
| PROTEIN:threonine synthase | ||||||
| PROTEIN:homoserine kinase | ||||||
| PROTEIN:aspartate kinase | ||||||
| RNA:Arg tRNA | ||||||
| RNA:Pro tRNA | ||||||
| RNA:Ser tRNA | ||||||
| PROTEIN:malic enzyme | ||||||
| PROTEIN:FixH protein | ||||||
| PROTEIN:cytochrome c | ||||||
| PROTEIN:cytochrome c oxidase, cbb3-type, subunit I | ||||||
| PROTEIN:cbb3-type cytochrome c oxidase maturation | ||||||
| PROTEIN:HAD superfamily ATPase | ||||||
| PROTEIN:ribosome-associated GTPase EngA | ||||||
| PROTEIN:lipoate synthase | ||||||
| PROTEIN:50S ribosomal protein L34P | ||||||
| PROTEIN:succinyl-CoA synthetase subunit alpha | ||||||
| PROTEIN:CAAX amino terminal protease family | ||||||
| RNA:Leu tRNA | ||||||
| RNA:Leu tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:pyruvate:ferredoxin oxidoreductase-like 2- | ||||||
| PROTEIN:chromosome partitioning ATPase | ||||||
| PROTEIN:tryptophanyl-tRNA synthetase | ||||||
| PROTEIN:ResB-like family | ||||||
| PROTEIN:cytochrome c biogenesis ABC transporter pe | ||||||
| PROTEIN:outer membrane protein/protective antigen | ||||||
| PROTEIN:asparaginyl-tRNA synthetase | ||||||
| RNA:Ser tRNA | ||||||
| RNA:Met tRNA | ||||||
| PROTEIN:50S ribosomal protein L21 | ||||||
| PROTEIN:50S ribosomal protein L27P | ||||||
| RNA:Arg tRNA | ||||||
| RNA:- | ||||||
| PROTEIN:30S ribosomal protein S6 | ||||||
| PROTEIN:30S ribosomal protein S18 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:dihydrodipicolinate synthase | ||||||
| PROTEIN:bacterial peptide chain release factor 2 | ||||||
| PROTEIN:dihydrodipicolinate reductase | ||||||
| PROTEIN:30S ribosomal protein S21/signal peptidase | ||||||
| PROTEIN:shikimate 5-dehydrogenase | ||||||
| PROTEIN:GTP-binding protein Obg/CgtA | ||||||
| PROTEIN:dihydrolipoamide dehydrogenase | ||||||
| RNA:Leu tRNA | ||||||
| PROTEIN:hypothetical protein | ||||||
| RNA:Met tRNA | ||||||
| PROTEIN:2-oxoglutarate dehydrogenase, E1 component | ||||||
| PROTEIN:2-oxoglutarate dehydrogenase complex dihyd | ||||||
| PROTEIN:Sec-independent protein secretion pathway | ||||||
| PROTEIN:SsrA-binding protein | ||||||
| PROTEIN:putative metal-sulfur cluster biosynthetic | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:chaperonin GroL | ||||||
| PROTEIN:co-chaperonin GroES | ||||||
| PROTEIN:tRNA-i(6)A37 thiotransferase enzyme MiaB | ||||||
| PROTEIN:iron-regulated ABC transporter membrane co | ||||||
| PROTEIN:FeS assembly ATPase SufC | ||||||
| PROTEIN:Fe-S cluster assembly ABC transporter perm | ||||||
| PROTEIN:cysteine desulfurase | ||||||
| PROTEIN:translation initiation factor IF-2 | ||||||
| PROTEIN:3-deoxy-D-arabino-heptulosonate 7-phosphat | ||||||
| PROTEIN:prephenate dehydratase | ||||||
| PROTEIN:aspartate-semialdehyde dehydrogenase | ||||||
| PROTEIN:30S ribosomal protein S20P | ||||||
| RNA:Glu tRNA | ||||||
| PROTEIN:3-phosphoshikimate 1-carboxyvinyltransfera | ||||||
| PROTEIN:30S ribosomal protein S16 | ||||||
| RNA:Gln tRNA | ||||||
| PROTEIN:DNA gyrase subunit B | ||||||
| PROTEIN:putative S-adenosylmethionine-dependent me | ||||||
| PROTEIN:aspartate/tyrosine/aromatic aminotransfera | ||||||
| PROTEIN:50S ribosomal protein L32 | ||||||
| PROTEIN:pyruvate/2-oxoglutarate dehydrogenase comp | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:sigma-70 family RNA polymerase sigma facto | ||||||
| PROTEIN:polyribonucleotide nucleotidyltransferase | ||||||
| PROTEIN:30S ribosomal protein S15P | ||||||
| PROTEIN:ubiquinone/menaquinone biosynthesis methyl | ||||||
| PROTEIN:50S ribosomal protein L31P | ||||||
| PROTEIN:30S ribosomal protein S12P | ||||||
| PROTEIN:30S ribosomal protein S7P | ||||||
| PROTEIN:translation elongation factor EF-2/EF-G | ||||||
| PROTEIN:30S ribosomal protein S10P | ||||||
| PROTEIN:50S ribosomal protein L3P | ||||||
| PROTEIN:50S ribosomal protein L4 | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:50S ribosomal protein L2P | ||||||
| PROTEIN:30S ribosomal protein S19P | ||||||
| PROTEIN:50S ribosomal protein L22 | ||||||
| PROTEIN:30S ribosomal protein S3P | ||||||
| PROTEIN:50S ribosomal protein L16P | ||||||
| PROTEIN:30S ribosomal protein S17P | ||||||
| PROTEIN:50S ribosomal protein L14P | ||||||
| PROTEIN:50S ribosomal protein L5P | ||||||
| PROTEIN:30S ribosomal protein S14P | ||||||
| PROTEIN:30S ribosomal protein S8P | ||||||
| PROTEIN:50S ribosomal protein L6P | ||||||
| PROTEIN:50S ribosomal protein L18P | ||||||
| PROTEIN:30S ribosomal protein S5P | ||||||
| PROTEIN:50S ribosomal protein L15P | ||||||
| PROTEIN:preprotein translocase subunit SecY | ||||||
| PROTEIN:bacterial translation initiation factor 1 | ||||||
| PROTEIN:50S ribosomal protein L36P | ||||||
| PROTEIN:30S ribosomal protein S13P | ||||||
| PROTEIN:30S ribosomal protein S11P | ||||||
| PROTEIN:30S ribosomal protein S4P | ||||||
| PROTEIN:DNA-directed RNA polymerase subunit alpha/ | ||||||
| PROTEIN:50S ribosomal protein L17P | ||||||
| PROTEIN:diaminopimelate epimerase | ||||||
| PROTEIN:S-adenosyl-methyltransferase MraW | ||||||
| PROTEIN:NAD-dependent aldehyde dehydrogenase | ||||||
| PROTEIN:DNA mismatch repair protein MutS | ||||||
| PROTEIN:argininosuccinate lyase | ||||||
| RNA:Arg tRNA | ||||||
| PROTEIN:pyruvate dehydrogenase E1 component subuni | ||||||
| PROTEIN:pyruvate/2-oxoglutarate dehydrogenase comp | ||||||
| PROTEIN:membrane protein TerC | ||||||
| PROTEIN:glyceraldehyde-3-phosphate dehydrogenase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:rRNA methylase | ||||||
| PROTEIN:phenylalanyl-tRNA synthetase subunit alpha | ||||||
| PROTEIN:L-threonine ammonia-lyase | ||||||
| PROTEIN:ketol-acid reductoisomerase | ||||||
| PROTEIN:hypothetical protein | ||||||
| PROTEIN:acetolactate synthase large subunit | ||||||
| PROTEIN:dihydroxy-acid dehydratase |
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Last modified: 15/06/2012.