A Program for assigning Secondary Structures in proteins

 ASSP - Reference:

Kumar, P. & Bansal, M. (2015). Identification of local variations within secondary structures of proteins.Acta Crystallogr. Sec.D. 71 (5): 1077-1086. [Link to paper at publisher's site]

 DSSP - References:

Touw, W. (2015). A series of PDB related databases for everyday needs. Nucleic Acids Research (Database issue). 43: D364-D368.

Kabsch, W. & Sander, C. (1983). Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers. 22: 2577-2637.

 STRIDE - Reference:

Frishman, D. & Argos, P. (1995). Knowledge-Based Protein Secondary Structure Assignment. Knowledge-Based Protein Secondary Structure Assignment. 23: 566-579.

We would greatly appreciate a citation of our work, in case you publish your results obtained by using ASSP. If you use DSSP or STRIDE program for the comparision of secondary structure assignments with those of ASSP, please cite the respective article(s) mentioned above.

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