References

 

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  1. Allawi H T and SantaLucia J Jr 1997 Thermodynamics and NMR of internal G.T mismatches in DNA; Biochemistry  36:10581-94. (PDF)

  2. Kanhere A and Bansal M 2003 Identification of additional 'punctuation marks' in genomic DNA; in Proceedings of FAOBMB: Bangalore, 139.

  3. Kanhere A and Bansal M 2005a Structural properties of promoters: similarities and differences between prokaryotes and eukaryotes; Nucleic Acids Res. 33:3165-3175. (PDF)

  4. Kanhere A and Bansal M 2005b A novel method for prokaryotic promoter prediction based on DNA stability; BMC Bioinformatics  6:1. (PDF)

  5. Keseler I M, Collado-Vides J, Gama-Castro S, Ingraham J, Paley S, Paulsen IT, Peralta-Gil M and Karp PD 2005 EcoCyc: A comprehensive database resource for Escherichia coli; Nucleic Acids Res.e33:D334-7. (PDF)

  6. Rangannan V and Bansal M 2007 Identification and annotation of promoter regions in microbial genome sequences on the basis of DNA stability; J. Biosci. 32(5):851-862. (PDF)

  7. Rangannan V and Bansal M 2009 Relative stability of DNA as a generic criterion for promoter prediction: whole genome annotation of microbial genomes with varying nucleotide base composition; Molecular Biosystems. DOI:10.1039/B906535K. (In Press)

  8. SantaLucia J Jr 1998 A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbour thermodynamics; Proc. Natl. Acad. Sci. USA 95:1460-5. (PDF)
    

 

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